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Detailed information on CNT3067990


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675703Leersia perrieriSetaria viridis36.2249.1184.78138forward
CNT30523536Leersia perrieriSetaria italica57.2238.5885.32218forward
CNT30640872Leersia perrieriNymphaea colorata58.7929.5982.14224forward
CNT30316008Leersia perrieriCorylus avellana46.1926.9183.52176forward
CNT30516897Leersia perrieriJuglans regia63.7827.4981.48243forward
CNT30700805Leersia perrieriQuercus lobata47.5159.7481.77181forward
CNT30376704Leersia perrieriArabidopsis thaliana87.442.2681.38333forward
CNT30500604Leersia perrieriCoffea canephora59.5836.9181.06227forward
CNT30616460Leersia perrieriSesamum indicum91.8624.3980.57350forward
CNT30269263Leersia perrieriChenopodium quinoa87.9343.9681.49335forward
CNT30727661Leersia perrieriCorchorus capsularis67.4541.0582.88257forward
CNT30378927Leersia perrieriManihot esculenta65.0940.0681.85248forward
CNT30403468Leersia perrieriBeta vulgaris45.9322.6183.43175forward
CNT30710559Leersia perrieriGlycine max60.633581.39231forward
CNT30193210Leersia perrieriSecale cereale25.7245.7987.7698forward
CNT30304911Leersia perrieriTriticum aestivum98.1662.5483.69374forward
CNT30400271Leersia perrieriTriticum turgidum98.1675.5684.76374forward
CNT30592011Leersia perrieriMusa acuminata64.360.4981.22245forward
CNT3087851Leersia perrieriVigna radiata60.3725.1681.74230forward
CNT30234716Leersia perrieriBrassica oleracea47.7767.1682.97182forward
CNT30508941Leersia perrieriSolanum lycopersicum69.826779.32266forward
CNT30554634Leersia perrieriOryza glaberrima99.7445.9589.47380forward
CNT30443444Leersia perrieriAegilops tauschii79.7932.6583.22304forward
CNT30256659Leersia perrieriAvena sativa105.2556.0882.04401forward
CNT30668234Leersia perrieriTriticum dicoccoides51.9733.6782.32198forward
CNT3062262Leersia perrieriArabidopsis lyrata87.460.7781.38333forward
CNT3079663Leersia perrieriBrassica juncea65.8847.1880.88251forward
CNT30263848Leersia perrieriBrassica rapa56.4350.8384.19215forward
CNT30468540Leersia perrieriSaccharum spontaneum104.4645.9681.91398forward
CNT30141877Leersia perrieriLolium perenne88.7175.4583.43338forward
CNT3016767Leersia perrieriZea mays93.4447.0980.9356forward
CNT30608057Leersia perrieriGossypium raimondii61.1539.2984.98233forward
CNT30216750Leersia perrieriKalanchoe fedtschenkoi80.8462.8680.52308forward
CNT30205386Leersia perrieriHelianthus annuus66.1435.2481.35252forward
CNT30713436Leersia perrieriMalus domestica golden46.1954.6682.39176forward
CNT30625277Leersia perrieriDaucus carota58.0135.9981.45221forward
CNT30688581Leersia perrieriTriticum urartu83.254.5683.91317forward
CNT30341751Leersia perrieriEragrostis tef99.7478.5190.26380forward
CNT30476898Leersia perrieriArabidopsis halleri87.1472.0281.93332forward
CNT30366537Leersia perrieriSorghum bicolor98.9543.2384.62377forward
CNT30620243Leersia perrieriCajanus cajan58.7967.4782.59224forward
CNT30596736Leersia perrieriOryza meridionalis88.7144.7788.17338forward
CNT30354603Leersia perrieriLactuca sativa77.6943.7280.41296forward
CNT30370935Leersia perrieriOryza glumipatula99.7439.2689.21380forward
CNT30574023Leersia perrieriVitis vinifera91.0862.4179.54347forward
CNT30642025Leersia perrieriCannabis sativa65.0948.3480.65248forward
CNT3028162Leersia perrieriTheobroma cacao58.7939.9383.04224forward
CNT30109704Leersia perrieriOryza longistaminata56.4338.6789.77215forward
CNT30121127Leersia perrieriCitrus clementina71.3933.3380.88272forward
CNT30149986Leersia perrieriBrachypodium distachyon94.2340.0287.47359forward
CNT30103004Leersia perrieriOryza rufipogon99.7438.1189.74380forward
CNT30584594Leersia perrieriEchinochloa crusgalli93.4457.6183.71356forward
CNT30497905Leersia perrieriDigitaria exilis98.9541.7585.68377forward
CNT30176441Leersia perrieriVigna angularis69.8243.9780.45266forward
CNT30558075Leersia perrieriPanicum hallii98.9547.7883.55377forward
CNT30551544Leersia perrieriOryza brachyantha93.4451.2285.96356forward
CNT30114394Leersia perrieriFicus carica28.0817.9885.98107forward
CNT30335475Leersia perrieriCynara cardunculus66.1419.483.33252forward
CNT3049385Leersia perrieriCucumis sativus65.8831.6981.67251forward

Expression of CNT3067990

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MQAMLGCMRGRWGCMRETSDCMMEMLGYMTAMLGCMTVMWGCKMEMLGCMQVKLGYMQEN*

Sequence

>CNT3067990
GGTTGGACTGTAGTTTGGCGAAGTTGGGCTGTAGCTTGGTGATGTCGGGCTGTACCCAGGAGAAGTAGGGCTGTATGCAGGCGATGTTGGGCTGTATGAG
GGGGAGGTGGGGCTGTATGAGGGAGACGTCGGACTGTATGATGGAGATGTTGGGCTATATGACGGCGATGTTGGGCTGTATGACGGTGATGTGGGGCTGT
AAGATGGAGATGTTGGGCTGTATGCAGGTGAAGTTGGGCTATATGCAGGAGAATTAGGACTATAAACTGGTGATGTGGGACTGTAGCTCGGAGAAGTGGG
ACTATAACTTGGCGAGGTGGGGCTGTAACTTGGTGATGTAGGACTATAGCTAGGAGATGTAGGGCTGTAGCTTGGAGATGT