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Detailed information on CNT30713436


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 3e-19

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675703Malus domestica goldenSetaria viridis69.5779.7280.8224forward
CNT30523536Malus domestica goldenSetaria italica61.1834.8781.73197forward
CNT30536082Malus domestica goldenEucalyptus grandis52.828.7284.12170forward
CNT30315993Malus domestica goldenCorylus avellana95.0330.5182.35306forward
CNT30516897Malus domestica goldenJuglans regia92.5533.7181.21298forward
CNT30700805Malus domestica goldenQuercus lobata88.293.7380.99284forward
CNT30377104Malus domestica goldenArabidopsis thaliana65.8430.0382.55212forward
CNT30616399Malus domestica goldenSesamum indicum53.4224.0284.3172forward
CNT30269232Malus domestica goldenChenopodium quinoa66.7733.8181.86215forward
CNT3021339Malus domestica goldenCitrullus lanatus51.8626.3483.83167forward
CNT30727660Malus domestica goldenCorchorus capsularis60.5635.6583.08195forward
CNT30378908Malus domestica goldenManihot esculenta59.9420.4482.9193forward
CNT30403468Malus domestica goldenBeta vulgaris97.5240.5779.3314forward
CNT30489068Malus domestica goldenOlea europaea65.8442.9182.08212forward
CNT30506121Malus domestica goldenNicotiana attenuata43.4833.8283.57140forward
CNT30710435Malus domestica goldenGlycine max58.3932.5882.45188forward
CNT3042412Malus domestica goldenPrunus dulcis78.8834.2886.61254forward
CNT30304911Malus domestica goldenTriticum aestivum55.5929.9383.8179forward
CNT30400271Malus domestica goldenTriticum turgidum55.5936.1683.24179forward
CNT30559890Malus domestica goldenActinidia chinensis59.3227.9683.77191forward
CNT3087924Malus domestica goldenVigna radiata25.7827.387.9583forward
CNT30235097Malus domestica goldenBrassica oleracea94.7238.0880305forward
CNT30508941Malus domestica goldenSolanum lycopersicum52.4842.5781.66169forward
CNT30145737Malus domestica goldenMedicago truncatula63.0432.9582.76203forward
CNT30442780Malus domestica goldenAegilops tauschii44.4118.0382.52143forward
CNT30256655Malus domestica goldenAvena sativa50.9336.5381.71164forward
CNT30311725Malus domestica goldenCamelina sativa59.6347.2982.81192forward
CNT30263848Malus domestica goldenBrassica rapa87.2766.4380.07281forward
CNT30140910Malus domestica goldenLolium perenne67.3960.7880.65217forward
CNT30605857Malus domestica goldenGossypium raimondii53.1121.0984.21171forward
CNT30216750Malus domestica goldenKalanchoe fedtschenkoi77.0250.6181.05248forward
CNT3067990Malus domestica goldenLeersia perrieri54.6646.1982.39176forward
CNT30648253Malus domestica goldenRosa chinensis84.4740.7883.82272forward
CNT30205370Malus domestica goldenHelianthus annuus52.826.0384.71170forward
CNT30688162Malus domestica goldenTriticum urartu55.5926.6483.8179forward
CNT30350935Malus domestica goldenEragrostis tef50.9322.0485.37164forward
CNT30620243Malus domestica goldenCajanus cajan44.142.7782.39142forward
CNT30354836Malus domestica goldenLactuca sativa52.829.4685.29170forward
CNT30154742Malus domestica goldenPrunus persica78.8830.2786.22254forward
CNT30410142Malus domestica goldenPapaver somniferum90.9944.5379.52293forward
CNT30574226Malus domestica goldenVitis vinifera68.3244.0980.91220forward
CNT30705862Malus domestica goldenPrunus avium90.0627.3188.62290forward
CNT30642027Malus domestica goldenCannabis sativa77.9539.3483.27251forward
CNT3027877Malus domestica goldenTheobroma cacao59.6348.6184.9192forward
CNT3051605Malus domestica goldenAmborella trichopoda23.9111.6190.9177forward
CNT3023412Malus domestica goldenPopulus trichocarpa61.835.2282.41199forward
CNT30121168Malus domestica goldenCitrus clementina97.5229.5780.57314forward
CNT3035160Malus domestica goldenCucumis melo48.1430.7586.45155forward
CNT30150463Malus domestica goldenBrachypodium distachyon51.861983.23167forward
CNT30114394Malus domestica goldenFicus carica84.4745.7183.46272forward
CNT30335475Malus domestica goldenCynara cardunculus54.9713.6382.49177forward
CNT3049544Malus domestica goldenCucumis sativus43.4817.4890.71140forward

Expression of CNT30713436

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MEMWGCRREKLGCRRAKLGCRRAKLGCMKETWDCSLVRWGCSWE

Sequence

>CNT30713436
CTGTAGTTCGGAGAGGTAGGACTGTATGGACTAGATGGTGACAATCTTGGACTGCTTGGAGAGTAAGCTGACGACGGACTGTACTTGGCAGACTGAGGAT
TATAGCTTGGAGATGTAGGGCTGTAACTGGGCGAGGTTGGGCTGTAACCAGGAGAAGTTGGGCTGTAGGCTGGCGAGGTAGGGCTGTAGGATGGAGATGT
GGGGCTGTAGGAGGGAGAAGTTGGGCTGTAGGAGGGCGAAGTTGGGCTGTAGGAGGGCGAAGTTGGGCTGTATGAAGGAGACGTGGGACTGTAGCTTGGT
GAGGTGGGGCTGTAGCTGGGAG