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Detailed information on CNT30551544


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 6e-50

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675703Oryza brachyanthaSetaria viridis39.1496.880.51272forward
CNT30523536Oryza brachyanthaSetaria italica36.5544.9684.65254forward
CNT30640872Oryza brachyanthaNymphaea colorata49.7845.7180.35346forward
CNT30536082Oryza brachyanthaEucalyptus grandis36.9843.4182.49257forward
CNT30316008Oryza brachyanthaCorylus avellana38.7141.1382.9269forward
CNT30549101Oryza brachyanthaIpomoea triloba42.5950.1781.42296forward
CNT30516792Oryza brachyanthaJuglans regia50.6539.5581.82352forward
CNT30376704Oryza brachyanthaArabidopsis thaliana44.8939.5982.37312forward
CNT30500604Oryza brachyanthaCoffea canephora36.9841.7984.05257forward
CNT30616399Oryza brachyanthaSesamum indicum53.8152.2382.09374forward
CNT30269286Oryza brachyanthaChenopodium quinoa65.0468.880.97452forward
CNT30727661Oryza brachyanthaCorchorus capsularis32.6636.2683.26227forward
CNT30379051Oryza brachyanthaManihot esculenta51.851.5880.56360forward
CNT30403468Oryza brachyanthaBeta vulgaris29.0626.182.18202forward
CNT30524942Oryza brachyanthaPhaseolus vulgaris43.4545.0180.13302forward
CNT30628927Oryza brachyanthaVigna unguiculata37.4146.4381.54260forward
CNT30506120Oryza brachyanthaNicotiana attenuata51.6561.3779.94359forward
CNT30710529Oryza brachyanthaGlycine max41.2950.8981.18287forward
CNT3042435Oryza brachyanthaPrunus dulcis47.9148.1281.08333forward
CNT3091613Oryza brachyanthaSolanum tuberosum54.2449.8782.49377forward
CNT30193210Oryza brachyanthaSecale cereale24.679.9187.72171forward
CNT30304911Oryza brachyanthaTriticum aestivum43.3150.3385.38301forward
CNT30400271Oryza brachyanthaTriticum turgidum62.7388.0883.26436forward
CNT30559890Oryza brachyanthaActinidia chinensis50.7951.6882.44353forward
CNT30591858Oryza brachyanthaMusa acuminata37.1250.8981.4258forward
CNT3087851Oryza brachyanthaVigna radiata30.523.1984.43212forward
CNT30234460Oryza brachyanthaBrassica oleracea44.3243.8181.49308forward
CNT30508904Oryza brachyanthaSolanum lycopersicum54.246180.9377forward
CNT30554721Oryza brachyanthaOryza glaberrima103.0276.5888.41716forward
CNT30145737Oryza brachyanthaMedicago truncatula49.555.8479.94344forward
CNT30442780Oryza brachyanthaAegilops tauschii103.690.7981.11720forward
CNT30256659Oryza brachyanthaAvena sativa68.4966.5782.77476forward
CNT30668234Oryza brachyanthaTriticum dicoccoides43.7451.783.88304forward
CNT30312432Oryza brachyanthaCamelina sativa31.856.8181.9221forward
CNT3062262Oryza brachyanthaArabidopsis lyrata50.3663.8781.14350forward
CNT3079663Oryza brachyanthaBrassica juncea43.4556.7780.46302forward
CNT30263848Oryza brachyanthaBrassica rapa41.2967.8581.88287forward
CNT30468644Oryza brachyanthaSaccharum spontaneum36.1226.6785.66251forward
CNT30141877Oryza brachyanthaLolium perenne40.4362.7286.83281forward
CNT3016767Oryza brachyanthaZea mays59.8655.0382.93416forward
CNT30607989Oryza brachyanthaGossypium raimondii51.9451.7282.27361forward
CNT3067990Oryza brachyanthaLeersia perrieri51.2293.4485.96356forward
CNT30205386Oryza brachyanthaHelianthus annuus33.5332.5984.12233forward
CNT30688162Oryza brachyanthaTriticum urartu92.6695.8381.68644forward
CNT30350932Oryza brachyanthaEragrostis tef46.0471.5987.81320forward
CNT30476898Oryza brachyanthaArabidopsis halleri46.3369.8581.37322forward
CNT30366857Oryza brachyanthaSorghum bicolor58.5641.4585.01407forward
CNT30620243Oryza brachyanthaCajanus cajan34.8272.8981.82242forward
CNT30596736Oryza brachyanthaOryza meridionalis105.6197.2286.51734forward
CNT30354623Oryza brachyanthaLactuca sativa41.2944.7782.93287forward
CNT30370935Oryza brachyanthaOryza glumipatula108.4977.8985.68754forward
CNT30154777Oryza brachyanthaPrunus persica47.9141.6281.08333forward
CNT30410012Oryza brachyanthaPapaver somniferum48.9289.4780.29340forward
CNT30573979Oryza brachyanthaVitis vinifera49.0658.4982.4341forward
CNT30705862Oryza brachyanthaPrunus avium50.9433.3380.79354forward
CNT30642025Oryza brachyanthaCannabis sativa50.9469.0180.23354forward
CNT3028162Oryza brachyanthaTheobroma cacao33.094184.35230forward
CNT3051605Oryza brachyanthaAmborella trichopoda57.760.4879.05401forward
CNT30109704Oryza brachyanthaOryza longistaminata33.5341.9188.84233forward
CNT30121049Oryza brachyanthaCitrus clementina51.833.2782.22360forward
CNT3035176Oryza brachyanthaCucumis melo53.9668.1880375forward
CNT30330867Oryza brachyanthaDioscorea rotundata49.6447.7280.87345forward
CNT30150463Oryza brachyanthaBrachypodium distachyon103.7482.0383.36721forward
CNT30103173Oryza brachyanthaOryza rufipogon105.6175.5987.87734forward
CNT30577473Oryza brachyanthaOryza barthii41.7353.2187.93290forward
CNT30584450Oryza brachyanthaEchinochloa crusgalli67.4862.6285.29469forward
CNT30498009Oryza brachyanthaDigitaria exilis63.8845.3585.59444forward
CNT30176441Oryza brachyanthaVigna angularis27.9132.0782.99194forward
CNT30558075Oryza brachyanthaPanicum hallii63.4555.8982.99441forward
CNT30335475Oryza brachyanthaCynara cardunculus33.8118.0983.83235forward
CNT3049385Oryza brachyanthaCucumis sativus37.4132.8381.54260forward

Expression of CNT30551544

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MWGYKMVTWGCMQEKLGYMPEKLGYKLVMWDCSSEKWDYNLARWGCSLEM*

>peptide 2 (59 aa)
MEKWDCSWVRQDYMKERWGCILALDCIQEKMDCNHPLMMECSLVKVRVRKPFLQHMARTE

>peptide 3 (34 aa)
NLEMSDCKGSALGCLENTHVKDYTWPKKDCNLAR*

Sequence

>CNT30551544
GTAATTTGGAGATGTCTGACTGTAAGGGCTCAGCCTTGGGCTGCTTGGAGAATACGCATGTGAAGGACTATACTTGGCCGAAGAAGGATTGTAACTTGGC
GAGGTAGGACTGTAATTTGGTGAAGTTGGGCTGTAGCTTGGAGATGTCGGACTGTAGCCAGGCGAGGTAGGGCTGTATGCAGGCGATGTTGGGCTGTATG
AGGGTGAGGTGGGGCTGTATGATGGAGATGTTGGGCTATATGATGGTGATGTAGGGCTGTAAGACGGTGATGTGGGGCTATAAGATGGTGACGTGGGGCT
GTATGCAGGAGAAGTTGGGCTATATGCCGGAGAAGTTGGGCTATAAACTGGTGATGTGGGACTGTAGCTCGGAGAAGTGGGACTATAACTTGGCGAGGTG
GGGCTGTAGCTTGGAGATGTAGGGCTGTAGCTTGGAGATGTTGGCGAGTATGATGGACTGGTCGGCGAGTATGATGGGCTGGTAGGTGAGTAAGTAGGAG
AGCCAGGTGTATAAGATGGAGAAGTGGGACTGTAGCTGGGTGAGGCAGGACTATATGAAGGAGAGGTGGGGCTGTATCCTGGCCCTGGACTGTATACAGG
AGAAGATGGACTGTAACCACCCCCTGATGATGGAGTGTAGCCTGGTGAAGGTACGGGTGAGAAAGCCATTCCTCCAACATATGGCGAGAACTGAG