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Detailed information on CNT30121127


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30400271Citrus clementinaTriticum turgidum29.6648.8982.23242forward
CNT3067990Citrus clementinaLeersia perrieri33.3371.3980.88272forward
CNT30688581Citrus clementinaTriticum urartu28.5540.182.4233forward
CNT30354603Citrus clementinaLactuca sativa62.6275.4878.28511forward

Expression of CNT30121127

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MLGCRKERLGCTMVRWGCMQVRWGYMPVRWGYSLVKLDCNWEKWGCNLERSGCSLGMLGCNLGRLGYSLENLDYKLVR*

>peptide 2 (28 aa)
MIRSPRHRRTSRCHAKLQTFHITRKLKFD

Sequence

>CNT30121127
CTGTAATTTGGAGATGTAGGGCTGTACGGACTGGCAGGAGATAATCTTGGACTACTTGGTGAGTAGGCCAGCGACGGACTGTATTTGGCAGACTGAGGAT
TGTAGCTTGGGGATGTAGGACTATAGGTTGGTGAAGTTGGGCTATAACTTGGTGAAGTTGGACTATAACCAGGAGAAGTGGGGCTATAGGCTGGTGAAGT
GGGGCTGTACGATGGAGAAGTGGGGCTGTATGACGGTGAGGTAGGGCTGTACGAAGGTGATGTTGGGCTGTAGGAAGGAGAGGTTGGGCTGTACGATGGT
GAGGTGGGGCTGTATGCAGGTGAGGTGGGGCTATATGCCGGTGAGGTGGGGCTATAGCTTGGTGAAGTTGGACTGTAACTGGGAGAAGTGGGGCTGTAAC
TTGGAGAGGTCGGGCTGTAGCTTGGGGATGTTGGGCTGTAACTTGGGGAGGTTGGGCTATAGCTTGGAGAACTTGGACTATAAGTTGGTGAGGTAGGGCT
ATATCCAGGCGAGGTGGGACTGTATCCAGGTGAAGTTGGGCTGTATCCAGGTGACGTGGGACTGTATCCAGGAGATGACGGACTGTAGCCTGGTGATGAT
GGGCTGTATCCAGGTGATGAAGTAGGAGAGAAGGCCATTCCACCAACATAAGGAGAAAACTGGGCATCCGTGACCGGGGACAGACGGAGATTTGGGCTAA
ACAAGTAACCTGGAGACATCATGCCATCATGATAAGGAGTCCCAGACACCGGAGAACGAGCAGGTGTCATGCCAAACTCCAGACCTTCCATATAACTAGG
AAGCTGAAGTTCGATG