SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Has orthologs?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 5616 records

CNCI status:   #
Max. peptide length:   #
Has orthologs:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT3027689 Populus trichocarpa KZ624594:1119-1713 (-) noncoding (-0.0004096)- - 49.45 2
CNT3027688 Populus trichocarpa KZ624557:101-1688 (-) noncoding (-0.160973)- 96 30.92 2
CNT3027687 Populus trichocarpa KZ624557:468-706 (+) noncoding (-0.036864)- 79 118.9 1
CNT3027686 Populus trichocarpa KZ624555:1950-2237 (+) noncoding (-0.0442368)- 33 140.98 1
CNT3027685 Populus trichocarpa KZ624453:691-2595 (-) coding (0.155)- 39 1.16 1
CNT3027684 Populus trichocarpa KZ624435:2918-3378 (-) coding (0.472)- 44 13.5 1
CNT3027683 Populus trichocarpa KZ624457:161-2647 (-) noncoding (-0.0004096)- 34 126.44 2
CNT3027682 Populus trichocarpa KZ624457:1633-2647 (-) noncoding (-0.0004096)- 34 0 2
CNT3027681 Populus trichocarpa KZ624377:2225-2492 (-) noncoding (-0.0004096)- 88 95 1
CNT3027680 Populus trichocarpa KZ624509:467-685 (+) noncoding (-0.376832)- 40 28.9 1
CNT3027679 Populus trichocarpa KZ624605:110-2752 (-) noncoding (-0.006144)- 46 53.7 2
CNT3027678 Populus trichocarpa KZ624296:1238-3013 (-) noncoding (-0.0741376)- 64 31.34 2Expressed preferentially in stem
CNT3027677 Populus trichocarpa KZ624597:161-725 (+) noncoding (-0.0397312)- 33 99.86 2
CNT3027676 Populus trichocarpa KZ624451:254-469 (-) noncoding (-0.0004096)- - 100.38 1
CNT3027675 Populus trichocarpa KZ624451:922-1265 (-) noncoding (-0.0004096)- - 9.51 2
CNT3027674 Populus trichocarpa KZ624132:23-768 (+) noncoding (-0.0114688)1e-52 (sp|Q38890|GUN25_ARATH) 42 176.9 1
CNT3027673 Populus trichocarpa KZ624235:3986-4369 (-) noncoding (-0.0004096)- 57 16.83 1
CNT3027672 Populus trichocarpa KZ624057:4887-5398 (+) noncoding (-0.0004096)- 36 24.34 1
CNT3027671 Populus trichocarpa KZ624106:1676-1880 (-) noncoding (-0.0004096)- - 100.81 1
CNT3027669 Populus trichocarpa KZ624595:240-6208 (-) noncoding (-0.0700416)- 36 234.59 3
CNT3027668 Populus trichocarpa KZ623973:5-3507 (-) noncoding (-0.0004096)1e-19 (sp|Q9FH97|EPS1_ARATH) 41 3.36 2Expressed preferentially in root
CNT3027667 Populus trichocarpa KZ623973:5-3497 (-) noncoding (-0.0004096)8e-17 (sp|Q9FH97|EPS1_ARATH) 38 15.21 2Expressed preferentially in root
CNT3027665 Populus trichocarpa KZ624000:6390-6610 (+) noncoding (-0.077824)- - 61.93 1
CNT3027664 Populus trichocarpa KZ623917:2756-3623 (+) noncoding (-0.049152)- 42 6.99 2Expressed preferentially in root
CNT3027663 Populus trichocarpa KZ623955:2371-2813 (-) noncoding (-0.0004096)- 45 15.66 1
CNT3027662 Populus trichocarpa KZ623876:713-1579 (+) noncoding (-0.07168)- 62 26.36 3
CNT3027661 Populus trichocarpa KZ623876:713-1579 (+) noncoding (-0.07168)- 72 4.78 3
CNT3027660 Populus trichocarpa KZ623868:5409-7196 (-) noncoding (-0.0004096)- - 5.19 3
CNT3027659 Populus trichocarpa KZ623868:5750-6287 (+) noncoding (-0.065536)- 40 1685.85 1
CNT3027658 Populus trichocarpa KZ623868:5409-7147 (-) noncoding (-0.0004096)- 33 3.9 2
CNT3027657 Populus trichocarpa KZ623862:2261-9094 (-) noncoding (-0.991232)- - 7.75 2
CNT3027656 Populus trichocarpa KZ623845:1550-2198 (-) noncoding (-0.0200704)6e-62 (sp|Q41596|CHI1_THECC) 56 19.67 2
CNT3027655 Populus trichocarpa KZ623836:6971-7427 (+) noncoding (-0.0004096)- - 11.58 1Expressed preferentially in root
CNT3027654 Populus trichocarpa KZ623857:8742-10038 (-) noncoding (-0.0004096)- 70 3.42 2
CNT3027653 Populus trichocarpa KZ623857:8790-10019 (-) noncoding (-0.110592)- 63 7.62 1
CNT3027652 Populus trichocarpa KZ623787:10686-11155 (-) noncoding (-0.0425984)- 33 13.2 1
CNT3027651 Populus trichocarpa KZ623784:7005-10570 (-) noncoding (-0.0004096)- 81 12.06 2
CNT3027650 Populus trichocarpa KZ623781:3839-4222 (-) noncoding (-0.0004096)- 33 0.55 2
CNT3027649 Populus trichocarpa KZ623781:3839-4222 (-) noncoding (-0.036864)- 47 0 1
CNT3027648 Populus trichocarpa KZ623781:3702-4107 (-) noncoding (-0.0004096)- 40 1.97 2
CNT3027646 Populus trichocarpa KZ624145:3958-4297 (+) noncoding (-0.0004096)- 69 189.88 2
CNT3027645 Populus trichocarpa KZ623765:2704-9615 (-) noncoding (-0.0303104)5e-50 (sp|Q147F9|AATPC_ARATH) 89 0 2
CNT3027644 Populus trichocarpa KZ623765:1161-8135 (-) noncoding (-0.0004096)5e-28 (sp|Q8VZG2|HSR4_ARATH) 59 11.4 2
CNT3027643 Populus trichocarpa KZ623765:1198-8126 (-) noncoding (-0.0237568)6e-28 (sp|Q8VZG2|HSR4_ARATH) 57 6.41 2
CNT3027642 Populus trichocarpa KZ623757:7222-7579 (+) coding (0.264)3e-17 (sp|Q9FKE9|RHD32_ARATH) 76 11.03 2
CNT3027641 Populus trichocarpa KZ623754:2-1518 (+) noncoding (-0.043008)- 94 5.63 1
CNT3027640 Populus trichocarpa KZ623751:9408-9751 (+) noncoding (-0.0004096)- 64 43.12 1
CNT3027639 Populus trichocarpa KZ623788:9093-10796 (-) noncoding (-0.0221184)- 67 6.37 2
CNT3027638 Populus trichocarpa KZ623748:261-506 (-) noncoding (-0.0004096)- 39 55.27 1
CNT3027637 Populus trichocarpa KZ623744:1394-7252 (-) noncoding (-0.0004096)- 76 20.57 2