Detailed information on CNT30234716


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549269Brassica oleraceaIpomoea triloba94.4647.5883.59256forward
CNT30506121Brassica oleraceaNicotiana attenuata56.0936.7182.89152forward
CNT30443444Brassica oleraceaAegilops tauschii62.7318.2682.94170forward
CNT3067990Brassica oleraceaLeersia perrieri67.1647.7782.97182forward
CNT30366979Brassica oleraceaSorghum bicolor60.5226.8481.71164forward

Expression of CNT30234716

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MQVTLGCMQEKLDCKQVKLDCNSGMLGCSLETWENMKDLLENKQG*

Sequence

>CNT30234716
GGGCTGTAAGAAGGAGATGTTGGACTGTAGGAGGGTGAAGTAGGGCTGTAAGAAGGCGATGTCGGACTGTAAGATGGTGAAGTTGGACTGTAAGATGGAG
AGGTAGGGCTGTATGCAGGTGACGTTGGGCTGTATGCAGGAGAAGTTGGACTGTAAGCAGGTGAAGTTGGACTGTAACTCGGGGATGTTGGGCTGTAGCT
TGGAGACGTGGGAGAATATGAAGGACTTGTTGGAGAATAAGCAGGGCTAGTTGGGCTATAGCCAGGAGAAC