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Detailed information on CNT30616460


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 5e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30536082Sesamum indicumEucalyptus grandis33.3880.9180.17479forward
CNT30316118Sesamum indicumCorylus avellana4080.3982.4574forward
CNT30378908Sesamum indicumManihot esculenta63.2896.1977.75908forward
CNT30403468Sesamum indicumBeta vulgaris26.6949.4880.68383forward
CNT30524942Sesamum indicumPhaseolus vulgaris37.1479.4378.05533forward
CNT30628702Sesamum indicumVigna unguiculata33.9471.0978.23487forward
CNT30506120Sesamum indicumNicotiana attenuata28.1569.0682.43404forward
CNT30708216Sesamum indicumGlycine max34.2988.0179.88492forward
CNT3042412Sesamum indicumPrunus dulcis30.8759.7881.49443forward
CNT3091732Sesamum indicumSolanum tuberosum26.6233.5485.08382forward
CNT30304911Sesamum indicumTriticum aestivum27.1865.2279.49390forward
CNT30400271Sesamum indicumTriticum turgidum27.1878.7979.49390forward
CNT3087851Sesamum indicumVigna radiata44.6770.1380.34641forward
CNT30235097Sesamum indicumBrassica oleracea41.1873.7880.2591forward
CNT30554580Sesamum indicumOryza glaberrima26.6956.3280.94383forward
CNT30256655Sesamum indicumAvena sativa17.9157.2480.93257forward
CNT30263540Sesamum indicumBrassica rapa28.9964.582.45416forward
CNT30468644Sesamum indicumSaccharum spontaneum28.854480.43414forward
CNT30141877Sesamum indicumLolium perenne15.1948.6683.03218forward
CNT3067990Sesamum indicumLeersia perrieri24.3991.8680.57350forward
CNT30688581Sesamum indicumTriticum urartu20.0749.5780.9288forward
CNT30350935Sesamum indicumEragrostis tef23.7645.8380.06341forward
CNT30596736Sesamum indicumOryza meridionalis26.6950.7381.2383forward
CNT30354603Sesamum indicumLactuca sativa19.340.9283.03277forward
CNT30370935Sesamum indicumOryza glumipatula25.2337.480.94362forward
CNT30573855Sesamum indicumVitis vinifera33.9480.982.96487forward
CNT30641843Sesamum indicumCannabis sativa29.4187.7382.7422forward
CNT3051702Sesamum indicumAmborella trichopoda30.8772.3978.78443forward
CNT30149777Sesamum indicumBrachypodium distachyon28.2243.9780.74405forward
CNT30103173Sesamum indicumOryza rufipogon28.9942.8480.05416forward
CNT30497905Sesamum indicumDigitaria exilis31.1549.580.76447forward
CNT30335477Sesamum indicumCynara cardunculus12.9648.9583.33186forward

Expression of CNT30616460

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MQDLLGYIQVNWDYMLGKWGYNQGKWGCNQEKWGYNQEMMGCIQERTGCNLEMM*

>peptide 2 (74 aa)
MTEKLGCMMERWDCKKVRLGCKMERLGCKRVTLGCKRVKWGCKQGMLGCMQGMLGCMQGRLGYSSEMSDCNLEM*

Sequence

>CNT30616460
TTGCACAAGAAATACAGAGATGCCCATAGCCCCTGAACTTCCCAACTAACGTCTTTGGCCATTTGGAAAGTTAATTTGACAATGATGATATACTCGAATT
AATCAACTTGAAGCCAGATTGGATTATTAGAATCTTGAAGAATAAATAAGGCCCCTTCTAACTATAAAATGGATTCTCCTTAGAAATCAACTAGCTATAT
AGTACATTAAAGACTGTTCAGACAATCAATGATGAGAAAAGTTAAGGTGACCAAGTTGGAGCATTTCAATTTCTTTTACTCCTAGAGCAAGTTCCACAGA
GACTCTCACTGGGAAAATTGACATAATGAATTTACCTGCTTGGGCTATAACTTGGACTAGATGGAGAATACGATGGAGATGTTGGAGAATATGAAGGTGA
GGACGGACTGTAAGGACTAGAAGGTGAGATCTTTGGACTTGTAGGTGAATATGCAAGAGAAGGGCTGTATCTTGCTGAAGGATTGTAACTTGGAGATGTA
GGGCTATAACTTGGTGAGGTAGGACTGTAACTTGGAGAGGTTGGGCTATAACCAGGGGAGGTCGGGCTGTAGGCAGGTGAGGTTGGGCTATATGACGGAG
AAGTTGGGCTGTATGATGGAGAGGTGGGACTGTAAGAAGGTGAGGTTGGGCTGTAAGATGGAGAGGTTGGGCTGTAAGAGGGTGACGTTGGGCTGTAAGA
GGGTGAAGTGGGGCTGTAAGCAGGGGATGTTGGGCTGTATGCAGGGGATGTTGGGCTGTATGCAGGGGAGGTTGGGCTATAGCTCGGAGATGTCGGACTG
TAACTTGGAGATGTAGGACTATAACTTGGTGAAGTCGGACTATAGCTAGGAGAAGTTGGGCTGTAGGTTGGAGAAGTAGGTGAGTAGGATGGGCTAGTTG
GAGAATATGCAGGACTTGTTGGGCTATATCCAGGTGAACTGGGACTATATGTTGGGGAAGTGGGGCTATAACCAGGGGAAGTGGGGCTGTAACCAGGAGA
AGTGGGGCTATAACCAGGAGATGATGGGCTGTATCCAGGAGAGGACGGGCTGTAACCTGGAGATGATGTAGGAGAGAAGGCCATTCCACCAACATAAGGA
GAAAACTGGGCATCTGTAACAGGAGATAACCGCAGATTTGGGCTGAGCAAATAACTTGGTGACATCATGCCGTCATGATACGGGGTTCCTGTAAGTGGGG
AACGAGCAGGTGTCATGCCAAATTCCAGGCCACCACCTTCCATGTAACTGGGTAAAGGGATCTCAATAGCTTGTTTTAACATCTCCTCGTTCAGATACAA
GGCGCAGTCTCCAGTGCCAATTGGTGCAAGCTGACCCAACATAATGTTTTCAGTGACACCCCTTAGATGGTCCGTTTCTGCATAGACAGCAGCATCAAGC
AGAATGTCCACCGTTTCCTCGAAGGAGCATCTCAT