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Detailed information on CNT30269263


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 4e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727660Chenopodium quinoaCorchorus capsularis47.966.7380365forward
CNT3091613Chenopodium quinoaSolanum tuberosum47.5147.8881.49362forward
CNT30304911Chenopodium quinoaTriticum aestivum57.3573.0881.01437forward
CNT30400271Chenopodium quinoaTriticum turgidum57.3588.2880.55437forward
CNT30554580Chenopodium quinoaOryza glaberrima56.1762.9480.61428forward
CNT30145737Chenopodium quinoaMedicago truncatula43.1853.4181.46329forward
CNT30256659Chenopodium quinoaAvena sativa42.7845.5983.13326forward
CNT30468540Chenopodium quinoaSaccharum spontaneum56.9650.1282.03434forward
CNT3016767Chenopodium quinoaZea mays58.5358.9981.84446forward
CNT3067990Chenopodium quinoaLeersia perrieri43.9687.9381.49335forward
CNT30688162Chenopodium quinoaTriticum urartu56.1763.6981.54428forward
CNT30366857Chenopodium quinoaSorghum bicolor56.1743.5882.01428forward
CNT30408809Chenopodium quinoaPapaver somniferum75.8566.980.97578forward
CNT30642025Chenopodium quinoaCannabis sativa62.4792.7978.57476forward
CNT3035176Chenopodium quinoaCucumis melo59.4582.3679.69453forward
CNT30149986Chenopodium quinoaBrachypodium distachyon56.6948.1681.48432forward
CNT30497905Chenopodium quinoaDigitaria exilis57.0948.1781.15435forward
CNT30558075Chenopodium quinoaPanicum hallii41.640.1883.91317forward
CNT3049385Chenopodium quinoaCucumis sativus50.2648.3680.94383forward

Expression of CNT30269263

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MMEMWDCKMEMWGCMTEMWGCTMEMWGCRLETWGCRLETWGCRLETWGCRLETWGCSLETWGCSLETWGCS*

Sequence

>CNT30269263
TGTAATTTGGGGAGGTAGGGCTGTAGGGACTGGATGGTGATATTCTTGGGCTGCTTGGAGAGTATGCAAGTGATGGACTGTATTTGGCTGAAGGGTTATA
GCTTGGAGATGTAGGACTATAGCTAGGTGAAGTAGGACTATAACTTGGGGATGTAGGGCTATATCCTGGAGATGTAGGGCTGTAAGCAGGAGATGTAGGG
CTGTACGACGGAGAAGTAGGGCTGTATGATGGAGATGTGGGACTGTAAGATGGAGATGTGGGGCTGTATGACGGAGATGTGGGGCTGTACGATGGAGATG
TGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGCTTGG
AGACGTGGGGCTGTAGCTTGGAGACGTGGGGCTGTAGCTAGGAGATGTGGGGCTGTAGCTTGGAGATGTGGGGCTGTAAGATGGGCTGGTGGGTGAATAT
GCTGGGCTTGTAGGACTATAGCCAGGAGACCCAGGACTGTAAGTCGGGGAAGTTGGACTATATCCTGGAGAAGTTGGGCTATATCCAGGAGAAGTTGGGC
TATATCCAGGCGAATTTGGTGAGAGATAAGCAGGAGATGAAGCAGGAGAGAAGGCCATGCCACCAACAAATGGAGAAAATGAAGCATCATTAATGGGCGA
ATGTCGGATATTTGGGCTGAGCAAGTAGCTAGGAGACATCATACTCTCATGGTAAGGTGTTC