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Detailed information on CNT30516897


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30536042Juglans regiaEucalyptus grandis59.0594.9181.8522forward
CNT30500604Juglans regiaCoffea canephora55.279.3580.53488forward
CNT3021333Juglans regiaCitrullus lanatus64.8296.7982.2573forward
CNT30403468Juglans regiaBeta vulgaris32.5837.2182.29288forward
CNT30524942Juglans regiaPhaseolus vulgaris73.6497.0281.11651forward
CNT30628702Juglans regiaVigna unguiculata68.187.8879.9602forward
CNT30489068Juglans regiaOlea europaea46.4983.282.48411forward
CNT30708216Juglans regiaGlycine max63.0199.6482.23557forward
CNT3091337Juglans regiaSolanum tuberosum75.5781.8678.29668forward
CNT30235097Juglans regiaBrassica oleracea84.3993.1380.97746forward
CNT30508904Juglans regiaSolanum lycopersicum44.1263.1181.54390forward
CNT30443444Juglans regiaAegilops tauschii29.327.8281.85259forward
CNT30606053Juglans regiaGossypium raimondii39.2557.4586.74347forward
CNT30216750Juglans regiaKalanchoe fedtschenkoi51.1392.2480.09452forward
CNT3067990Juglans regiaLeersia perrieri27.4963.7881.48243forward
CNT30205370Juglans regiaHelianthus annuus56.2276.1179.88497forward
CNT30713436Juglans regiaMalus domestica golden33.7192.5581.21298forward
CNT30625810Juglans regiaDaucus carota74.5597.279.21659forward
CNT30341749Juglans regiaEragrostis tef29.8659.3382.58264forward
CNT30620207Juglans regiaCajanus cajan36.9915.2286.54327forward
CNT30596739Juglans regiaOryza meridionalis30.4341.3881.78269forward
CNT30354603Juglans regiaLactuca sativa26.3634.4281.55233forward
CNT30370935Juglans regiaOryza glumipatula28.3925.9381.67251forward
CNT30154712Juglans regiaPrunus persica83.694.8784.3739forward
CNT30573925Juglans regiaVitis vinifera44.3447.9282.65392forward
CNT30705862Juglans regiaPrunus avium10083.2482.81884forward
CNT30642003Juglans regiaCannabis sativa40.7252.7982.5360forward
CNT30330867Juglans regiaDioscorea rotundata62.976.980.22556forward
CNT30577473Juglans regiaOryza barthii30.4349.3681.41269forward
CNT30558075Juglans regiaPanicum hallii29.0732.5784.05257forward

Expression of CNT30516897

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MMDCSQEMMGCSLEMKPEKTPFHQHKEKTEHL*

>peptide 2 (81 aa)
MMEMWGCMRVRSGCKMEKSGCRMEKSGCRMEKWGCMQVKWGCTQVKWGCKLVKWGYSSVMLGCKWEKWGYSWERWASKMDL*

Sequence

>CNT30516897
TAGGACTATATGGACTGGATGGGGACAATCTTGGACTGCTTGGTGAGTATGCCAGTGAAGGGCTATATTTAGCAGACTGAGGATTATAACTGGGAGATGT
AGGGCTATAGCTAGGTGAGGTTGGGCTATAGCTTGGAGAAGTTGGACTGTAACCTGGTGATGTGGGGCTATAGGCTGGTGAGGTAGGGCTGTATGATGGA
GATGTGGGGCTGTATGAGGGTGAGGTCGGGCTGTAAGATGGAGAAGTCGGGCTGTAGGATGGAGAAGTCGGGCTGTAGGATGGAGAAGTGGGGCTGTATG
CAGGTGAAGTGGGGCTGTACGCAGGTGAAGTGGGGCTGTAAGCTGGTGAAGTGGGGCTATAGCTCGGTGATGTTGGGCTGTAAGTGGGAGAAGTGGGGCT
ATAGCTGGGAGAGGTGGGCGAGTAAGATGGACTTGTAGGCGAATAGGCAGGACTGGTTGGACTATAACCCGGAGAACTAGGACTATAAGTAGGGGAAGTG
GGGCTATAGCCGGGAGAGGTGGGACTATATCCAGGGGATGTAGGACTATATCCTGGGGATGATGGACTGTAGCCAGGAGATGATGGGCTGTAGCCTGGAG
ATGAAGCCGGAGAAAACGCCATTCCACCAACATAAGGAGAAAACTGAGCATCTGTAATGGGCGACAGTCGGAGATTTGGGCTCAGCAAATAACTTGGAGA
CATCAAGCCCTCATGATAGGGAGTTCCGGAGACTGGAGAGTGGGAAGGTGTCATGCCAAAATCCAAACCATCCATATAACTAGGTAGCTGGAGTTCAATA
GCATTCTTCAACATCTCATCATTGAGATACAAGGCACAGTCCCCAGTGCCAATTGGTGCAAGCTGACCTAACATTATGTTTTCA