SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Has orthologs?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 4376 records

CNCI status:   #
Max. peptide length:   #
Has orthologs:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT30574575 Vitis vinifera M:669742-672350 (-) noncoding (-0.0688128)1e-80 (sp|Q0ZIY1|RK16_VITVI) 94 16.77 2
CNT30574574 Vitis vinifera M:315233-318598 (+) noncoding (-0.0278528)3e-76 (sp|Q36284|NU5M_MAIZE) 74 20.84 1Expressed preferentially in fruit
CNT30574573 Vitis vinifera M:694225-699868 (+) noncoding (-0.0294912)0.000000001 (sp|P80498|COX2_SOLTU) 70 4.67 2Expressed preferentially in leaf
CNT30574572 Vitis vinifera M:539239-572740 (-) coding (0.102)2e-112 (sp|P15688|NU2M_BETVU) 76 21.77 2Expressed preferentially in flower
CNT30574571 Vitis vinifera M:450265-456417 (-) coding (0.142)4e-60 (sp|P08977|RT13_MAIZE) 71 6.47 1Expressed preferentially in fruit
CNT30574570 Vitis vinifera M:694050-708298 (+) noncoding (-0.0167936)- 46 43.5 2Expressed preferentially in leaf
CNT30574569 Vitis vinifera M:694050-708343 (-) noncoding (-0.0131072)- 51 19.98 2Expressed preferentially in flower
CNT30574568 Vitis vinifera Un:2766375-2804979 (-) noncoding (-0.016384)- 39 25.75 3Expressed preferentially in root
CNT30574567 Vitis vinifera Un:6093625-6094875 (+) noncoding (-0.0282624)- 71 10.13 1Orthologs: CNT3019944
CNT30574565 Vitis vinifera Un:7624350-7624746 (-) noncoding (-0.004096)- 90 3.99 2
CNT30574564 Vitis vinifera Un:8541880-8564190 (-) noncoding (-0.0217088)2e-78 (sp|Q9ZRF1|MTDH_FRAAN) 40 18.93 2Expressed preferentially in root
CNT30574562 Vitis vinifera Un:5348032-5359538 (+) noncoding (-0.032768)- 43 1156.18 2Orthologs: CNT30511372, CNT3020877, CNT30710993, CNT30217899, CNT30433952, CNT3036538, CNT30206324
Expressed preferentially in root
CNT30574561 Vitis vinifera Un:11116160-11116901 (+) noncoding (-0.086016)0.0000000001 (sp|Q52QU2|AIL6_ARATH) 57 11.01 2
CNT30574560 Vitis vinifera Un:4504210-4504892 (-) noncoding (-0.0479232)- 48 20.75 2Orthologs: CNT30509818, CNT3011359, CNT30120943, CNT30217900, CNT30433944, CNT3037201
Expressed preferentially in root
CNT30574558 Vitis vinifera Un:7805130-7819243 (+) noncoding (-0.012288)1e-107 (sp|Q9SXB8|Y1133_ARATH) 70 10.99 2Expressed preferentially in fruit
CNT30574557 Vitis vinifera Un:4231798-4233738 (+) noncoding (-0.0004096)- 50 10.28 2Expressed preferentially in leaf
CNT30574556 Vitis vinifera Un:7990908-7991442 (-) noncoding (-0.0004096)- 37 7.1 2
CNT30574555 Vitis vinifera Un:9639360-9641501 (+) noncoding (-0.08192)6e-98 (sp|P17598|CATA1_GOSHI) 67 0.53 3
CNT30574554 Vitis vinifera Un:12456018-12456603 (-) noncoding (-0.065536)- 59 6.77 2
CNT30574552 Vitis vinifera Un:120710-122948 (+) noncoding (-0.004096)- 38 1.5 4Expressed preferentially in fruit
CNT30574551 Vitis vinifera Un:9637567-9637907 (-) noncoding (-0.0004096)- 46 12.45 2
CNT30574550 Vitis vinifera Un:5348049-5352636 (-) noncoding (-0.0499712)- 48 5704.09 2Orthologs: CNT30509818, CNT3020968, CNT30120699, CNT30711221, CNT30217900, CNT30434045, CNT3037170, CNT30212671
CNT30574549 Vitis vinifera Un:4776615-4777783 (-) noncoding (-0.032768)- 33 46.05 2Expressed preferentially in root
CNT30574548 Vitis vinifera Un:7850922-7865123 (+) noncoding (-0.0004096)- - 28.45 2
CNT30574547 Vitis vinifera Un:964472-966218 (-) noncoding (-0.0004096)- - 94.89 2
CNT30574545 Vitis vinifera Un:12137970-12139502 (+) noncoding (-0.0212992)- 80 5.18 2Expressed preferentially in root
CNT30574544 Vitis vinifera Un:12137934-12139739 (+) noncoding (-0.0323584)- 78 0.51 4Expressed preferentially in root
CNT30574543 Vitis vinifera Un:12008319-12008612 (+) noncoding (-0.0004096)- 30 16.38 2
CNT30574542 Vitis vinifera Un:4504206-4507894 (-) noncoding (-0.0049152)- 53 114.54 2Orthologs: CNT30509818, CNT3010382, CNT30120943, CNT30217925, CNT30433944, CNT3037201
Expressed preferentially in root
CNT30574541 Vitis vinifera Un:8547046-8564190 (-) noncoding (-0.038912)1e-62 (sp|P42754|MTDH_PETCR) 45 96.33 2Expressed preferentially in root
CNT30574540 Vitis vinifera Un:9098918-9099711 (+) coding (0.008)- 77 1.87 2
CNT30574539 Vitis vinifera Un:8821920-8822678 (+) noncoding (-0.0004096)- 75 25.57 2Expressed preferentially in leaf
CNT30574538 Vitis vinifera Un:1698836-1699912 (-) noncoding (-0.1024)- 47 8.69 2Expressed preferentially in root
CNT30574537 Vitis vinifera Un:4230396-4239285 (+) noncoding (-0.063488)- 44 5.06 3Expressed preferentially in leaf
CNT30574536 Vitis vinifera Un:2763612-2764344 (+) noncoding (-0.0004096)- 54 6.59 1Expressed preferentially in leaf
CNT30574535 Vitis vinifera Un:12418294-12419719 (-) noncoding (-0.0004096)- 41 10.23 1
CNT30574534 Vitis vinifera Un:11787937-11788688 (+) noncoding (-0.026624)- 70 7.32 2
CNT30574532 Vitis vinifera Un:12138231-12139186 (-) noncoding (-0.0004096)- 46 8.69 1
CNT30574531 Vitis vinifera Un:4504206-4504889 (-) noncoding (-0.045056)- 53 45417.4 2Orthologs: CNT30509818, CNT3011870, CNT30120943, CNT30217925, CNT30433944, CNT3037201
Expressed preferentially in root
CNT30574530 Vitis vinifera Un:3317969-3328256 (-) noncoding (-0.0004096)- 42 4.89 2
CNT30574529 Vitis vinifera Un:7838459-7861788 (+) noncoding (-0.0004096)- 50 1.39 2
CNT30574528 Vitis vinifera Un:4504210-4507911 (+) noncoding (-0.0114688)- 45 27141.9 2Orthologs: CNT30511372, CNT3011287, CNT30710993, CNT30217889, CNT30411635, CNT3036478, CNT30209169
Expressed preferentially in root
CNT30574527 Vitis vinifera Un:261246-261682 (-) noncoding (-0.0974848)- 36 2.72 1Expressed preferentially in root
CNT30574526 Vitis vinifera Un:8578126-8584261 (+) noncoding (-0.016384)- 60 4.96 2
CNT30574525 Vitis vinifera Un:8541880-8564190 (-) noncoding (-0.0004096)2e-78 (sp|Q9ZRF1|MTDH_FRAAN) 40 22.5 3Expressed preferentially in root
CNT30574522 Vitis vinifera Un:832365-833437 (-) noncoding (-0.167936)- 67 5.29 2
CNT30574521 Vitis vinifera Un:5347998-5354546 (-) noncoding (-0.0417792)- 51 8.88 2Orthologs: CNT30511557, CNT3020968, CNT30119950, CNT30710946, CNT30217900, CNT30434098, CNT3038953, CNT30212671
CNT30574520 Vitis vinifera Un:6468222-6495396 (-) noncoding (-0.0004096)2e-36 (sp|C0LGP4|Y3475_ARATH) - 1.53 2
CNT30574519 Vitis vinifera Un:822490-823608 (-) noncoding (-0.0004096)- 49 17.96 3
CNT30574518 Vitis vinifera Un:6400302-6408791 (+) noncoding (-0.06144)0 (sp|A5AEM3|THS4_VITVI) 77 24.52 2