Detailed information on CNT30625277


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 8e-15

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535924Daucus carotaEucalyptus grandis42.3588.7479.62260forward
CNT30549166Daucus carotaIpomoea triloba34.6931.784.04213forward
CNT30616511Daucus carotaSesamum indicum29.3227.5783.89180forward
CNT3021339Daucus carotaCitrullus lanatus39.938.6479.18245forward
CNT3017147Daucus carotaZea mays45.7739.380.43281forward
CNT30607691Daucus carotaGossypium raimondii26.2223.7882.61161forward
CNT3067990Daucus carotaLeersia perrieri34.5355.6481.6212forward
CNT30648253Daucus carotaRosa chinensis55.0550.6778.7338forward
CNT30350935Daucus carotaEragrostis tef31.626.0882.47194forward

Expression of CNT30625277

Peptides detected in this lncRNA

>peptide 1 (38 aa)
CNWGMSDCTGWMVIVLDCSGNMPGRGCTLQMKGCSLEM*

>peptide 2 (43 aa)
MLVSWGYNQERRGCTQERQGCTQERRGCTQVKRGYNLEKMQEKI

>peptide 3 (74 aa)
MMEKLDCMKVRLGCMMGRLDCRMGRLGCRTGSSGCRTERWGCRTERWGCKQVRWGCRQVRWGCSLGRWGCSWGR*

Sequence

>CNT30625277
CTGTAACTGGGGGATGTCGGACTGTACGGGCTGGATGGTGATAGTCTTGGACTGCTCGGGGAATATGCCAGGGAGGGGCTGTACTTTGCAGATGAAGGGT
TGTAGCTTGGAGATGTAGGACTATAGCTTGGAGATGTGGGACTGTAGCTCGGCGATGTGGGACTGTATGCAGGAGAAGTAGGACTATATGATGGAGAAGT
TGGACTGTATGAAGGTGAGGTTGGGCTGTATGATGGGGAGGTTGGACTGTAGGATGGGGAGGTTGGGCTGTAGGACGGGGAGCTCGGGCTGTAGGACGGA
GAGGTGGGGCTGTAGGACGGAGAGGTGGGGCTGTAAGCAGGTGAGGTGGGGCTGTAGGCAGGTGAGGTGGGGCTGTAGCTTGGGGAGGTGGGGCTGTAGC
TGGGGGAGGTAGGGGAGTAGGATGGACTTGTCGGTGAATATGTAGGGCTACTAGGACTATATCCTGGAGAGCTTGGACTATATGTTGGTGAGCTGGGGCT
ATAACCAGGAGAGGCGGGGCTGTACCCAGGAGAGGCAGGGCTGTACCCAGGAGAGGAGGGGCTGTACCCAGGTGAAGAGGGGCTATAACTTGGAGAAGAT
GCAGGAGAAAATCC