« Back to Triticum urartu search


Detailed information on CNT30688581


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 1e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316008Triticum urartuCorylus avellana42.6937.9282.66248forward
CNT30516792Triticum urartuJuglans regia49.9132.5882.41290forward
CNT30376379Triticum urartuArabidopsis thaliana43.233.7482.47251forward
CNT30616460Triticum urartuSesamum indicum49.5720.0780.9288forward
CNT30403468Triticum urartuBeta vulgaris28.7421.5884.43167forward
CNT30489027Triticum urartuOlea europaea31.3352.682.97182forward
CNT30710529Triticum urartuGlycine max48.8850.3580.63284forward
CNT3042412Triticum urartuPrunus dulcis44.7535.0982.31260forward
CNT30559889Triticum urartuActinidia chinensis22.0331.3785.94128forward
CNT30311656Triticum urartuCamelina sativa34.9436.5882.27203forward
CNT30263540Triticum urartuBrassica rapa51.1246.0582.15297forward
CNT30468525Triticum urartuSaccharum spontaneum72.8150.1885.34423forward
CNT3017147Triticum urartuZea mays48.3639.383.99281forward
CNT3067990Triticum urartuLeersia perrieri54.5683.283.91317forward
CNT30350933Triticum urartuEragrostis tef73.1554.2886.35425forward
CNT30366537Triticum urartuSorghum bicolor63.8642.5583.56371forward
CNT30354603Triticum urartuLactuca sativa32.8728.2183.25191forward
CNT30154791Triticum urartuPrunus persica44.7533.4682.31260forward
CNT30641843Triticum urartuCannabis sativa49.459.6780.14287forward
CNT3028162Triticum urartuTheobroma cacao46.8248.4880.51272forward
CNT30121127Triticum urartuCitrus clementina40.128.5582.4233forward
CNT30330867Triticum urartuDioscorea rotundata29.4323.6584.8171forward
CNT30497905Triticum urartuDigitaria exilis65.442.0884.21380forward
CNT3049385Triticum urartuCucumis sativus45.2733.2181.75263forward

Expression of CNT30688581

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MWGCSSGMLASMMDWSESMMDWWGCSWAMQGCMMEKWDCNHVLALG*

>peptide 2 (92 aa)
MTGMSGCMRATWGCMRVMSGCMRAMLGCTREKWGCMMATLGCKMATSGCMQEMSGCMLARSDYKPVMLDYSSEMWGYSLVMLGCSSEMWGCS*

Sequence

>CNT30688581
TATGATGGTGAGGTGGGCGAGTAGCTCGGTGACGTCGGGCTGTAACCAGGCGATGTAGGGCTGTATGCAGGCGATGTAGGGCTGTATGAGGGCGAGGTAG
GGCTGTATGACGGGGATGTCGGGCTGTATGAGGGCGACGTGGGGCTGTATGAGGGTGATGTCGGGCTGTATGAGGGCGATGTTGGGCTGTACGAGGGAGA
AGTGGGGCTGTATGATGGCGACGTTGGGCTGTAAGATGGCGACGTCGGGCTGTATGCAGGAGATGTCGGGCTGTATGCTGGCGAGGTCGGACTATAAACC
GGTGATGTTGGACTATAGCTCGGAGATGTGGGGCTATAGCTTGGTGATGTTGGGCTGTAGCTCGGAGATGTGGGGCTGTAGCTAGGAGATGTGGGGCTGT
AGCTCGGGGATGTTGGCGAGTATGATGGACTGGTCGGAGAGTATGATGGACTGGTGGGGCTGTAGCTGGGCGATGCAGGGCTGTATGATGGAGAAGTGGG
ACTGTAACCATGTCCTGGCCCTGGGCTGAACACCGGAGAAGATGGACTGTAACCACCTCCAGAGGATGGGCTGTAGTTTGA