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Detailed information on CNT30176441


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 5e-161

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523577Vigna angularisSetaria italica22.4821.9783.82136forward
CNT30640872Vigna angularisNymphaea colorata67.2753.7680.84407forward
CNT30536082Vigna angularisEucalyptus grandis47.9348.9980290forward
CNT30315993Vigna angularisCorylus avellana72.443.6781.28438forward
CNT30516792Vigna angularisJuglans regia53.3936.2982.04323forward
CNT30700558Vigna angularisQuercus lobata23.6452.9684.62143forward
CNT30376525Vigna angularisArabidopsis thaliana68.7654.3879.81416forward
CNT30500730Vigna angularisCoffea canephora62.3143.6380.64377forward
CNT30616511Vigna angularisSesamum indicum53.8849.9281.9326forward
CNT3021339Vigna angularisCitrullus lanatus32.5631.0782.74197forward
CNT30727661Vigna angularisCorchorus capsularis97.5294.2579.15590forward
CNT30378927Vigna angularisManihot esculenta67.2765.7579.85407forward
CNT30524942Vigna angularisPhaseolus vulgaris99.3489.5790.68601forward
CNT30628702Vigna angularisVigna unguiculata10088.3294.21605forward
CNT30195835Vigna angularisPisum sativum40.9997.6484.27248forward
CNT30506119Vigna angularisNicotiana attenuata48.9374.1982.09296forward
CNT30710467Vigna angularisGlycine max64.353.889.72389forward
CNT3042435Vigna angularisPrunus dulcis92.2380.6481.54558forward
CNT3091613Vigna angularisSolanum tuberosum65.9552.7880.95399forward
CNT30307041Vigna angularisTriticum aestivum49.5955.9781300forward
CNT30400271Vigna angularisTriticum turgidum50.5861.8282.03306forward
CNT30559890Vigna angularisActinidia chinensis65.4557.9880.56396forward
CNT30591858Vigna angularisMusa acuminata69.5983.0478.86421forward
CNT3087851Vigna angularisVigna radiata98.1864.9990.57594forward
CNT30234460Vigna angularisBrassica oleracea72.2362.1679.63437forward
CNT30508904Vigna angularisSolanum lycopersicum87.4485.680.53529forward
CNT30554580Vigna angularisOryza glaberrima57.3651.0378.96347forward
CNT30171519Vigna angularisTrifolium pratense33.8860.2985.85205forward
CNT30145737Vigna angularisMedicago truncatula67.7766.5684.88410forward
CNT30443444Vigna angularisAegilops tauschii52.8934.3779.38320forward
CNT30256655Vigna angularisAvena sativa45.9561.9280.94278forward
CNT30312353Vigna angularisCamelina sativa60.3389.0281.1365forward
CNT3062262Vigna angularisArabidopsis lyrata60.3366.6179.73365forward
CNT3079663Vigna angularisBrassica juncea60.3368.6179.73365forward
CNT30263540Vigna angularisBrassica rapa60.8357.0579.89368forward
CNT30468914Vigna angularisSaccharum spontaneum56.0336.9379.65339forward
CNT30141877Vigna angularisLolium perenne49.5966.9681300forward
CNT3017147Vigna angularisZea mays54.3846.0183.59329forward
CNT30607743Vigna angularisGossypium raimondii99.0188.7478.96599forward
CNT3067990Vigna angularisLeersia perrieri43.9769.8280.45266forward
CNT30648253Vigna angularisRosa chinensis97.0288.0178.53587forward
CNT30205386Vigna angularisHelianthus annuus48.9341.480.07296forward
CNT30688491Vigna angularisTriticum urartu46.4565.6580.07281forward
CNT30341749Vigna angularisEragrostis tef43.4759.180.99263forward
CNT30476941Vigna angularisArabidopsis halleri44.9633.9681.62272forward
CNT30366537Vigna angularisSorghum bicolor52.8936.780320forward
CNT30620207Vigna angularisCajanus cajan46.2813.0383.21280forward
CNT30596736Vigna angularisOryza meridionalis57.3645.9679.83347forward
CNT30354661Vigna angularisLactuca sativa33.5536.5182.76203forward
CNT30370935Vigna angularisOryza glumipatula54.3833.9979.64329forward
CNT30154742Vigna angularisPrunus persica95.5468.8981.49578forward
CNT30408809Vigna angularisPapaver somniferum70.2549.1980425forward
CNT30573870Vigna angularisVitis vinifera70.7460.7181.78428forward
CNT30705862Vigna angularisPrunus avium67.2738.3283.05407forward
CNT30642143Vigna angularisCannabis sativa46.9469.181.69284forward
CNT3027877Vigna angularisTheobroma cacao61.3293.9280.86371forward
CNT3051702Vigna angularisAmborella trichopoda97.5296.4177.97590forward
CNT30120999Vigna angularisCitrus clementina74.2133.4679.73449forward
CNT3035176Vigna angularisCucumis melo29.093282.95176forward
CNT30149986Vigna angularisBrachypodium distachyon49.2633.2279.87298forward
CNT30103173Vigna angularisOryza rufipogon44.9628.0180.15272forward
CNT30498009Vigna angularisDigitaria exilis56.8635.1480.23344forward
CNT30551544Vigna angularisOryza brachyantha32.0727.9182.99194forward
CNT30335475Vigna angularisCynara cardunculus77.6936.1878.51470forward
CNT3049385Vigna angularisCucumis sativus66.7851.0181.19404forward

Expression of CNT30176441

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MQVKSGCSWEKSGYNWVMWDCSWVMWDCSWVMLGYSWVMWESRMDWLANKPDL*

>peptide 2 (34 aa)
MWERSDCNLVMWDCSPEMWDCTQVMWGYTQAMMDY

Sequence

>CNT30176441
ATGGACTTGATGGAGACAATCTTGGACTGCTTGGAGAATATGCTAACGAAGGACTGTACTTTGCTGACTGGGGATTGTAACTAGGGGAAGTAGGACTATA
CGATGGGGATGTTGGGCTATATGAGGGTGACGTAGGGCTGTATCCAGGTGAAGTGGGGCTGTAAGCAGGGGATGCAGGGCTATATGATGGGGAGGTAGGG
CTGTAAGAGGGTGAAGTGGGGCTGTATGAAGGTGAGGTAGGACTATAAGAGGGTGACGTAGGACTGTAGGAAGGTGAAGTGGGACTGTAAGCAGGTGAAG
TGGGGCTGTATGCAGGTGAAGTCGGGCTGTAGCTGGGAGAAGTCGGGCTATAACTGGGTGATGTGGGACTGTAGCTGGGTGATGTGGGACTGTAGCTGGG
TGATGTTGGGCTATAGCTGGGTGATGTGGGAGAGTAGGATGGACTGGTTGGCGAATAAGCCGGACTTGTAGGACTATATCCTGGAGAACTAGGGCTATAT
GTGGGAGAGGTCGGACTGTAACCTGGTGATGTGGGACTGTAGCCCGGAGATGTGGGACTGTACCCAGGTGATGTGGGGCTATACCCAGGCGATGATGGAC
TATAG