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Detailed information on CNT30141877

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 3e-23

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30675703	Lolium perenne	Setaria viridis	44.64	71.17	83	200	forward
CNT30536082	Lolium perenne	Eucalyptus grandis	47.99	36.32	82.79	215	forward
CNT30316008	Lolium perenne	Corylus avellana	54.69	37.46	82.04	245	forward
CNT30549101	Lolium perenne	Ipomoea triloba	41.29	31.36	83.78	185	forward
CNT30377104	Lolium perenne	Arabidopsis thaliana	57.37	36.4	82.1	257	forward
CNT30616460	Lolium perenne	Sesamum indicum	48.66	15.19	83.03	218	forward
CNT30267763	Lolium perenne	Chenopodium quinoa	60.04	38.59	85.5	269	forward
CNT3021339	Lolium perenne	Citrullus lanatus	73.44	51.89	79.03	329	forward
CNT30403782	Lolium perenne	Beta vulgaris	54.91	58.85	82.11	246	forward
CNT30628902	Lolium perenne	Vigna unguiculata	64.29	65.01	80.21	288	forward
CNT30489027	Lolium perenne	Olea europaea	49.55	64.16	84.23	222	forward
CNT30710467	Lolium perenne	Glycine max	63.39	39.28	80.63	284	forward
CNT3091361	Lolium perenne	Solanum tuberosum	52.01	31.7	80.69	233	forward
CNT30193210	Lolium perenne	Secale cereale	38.17	79.91	90.64	171	forward
CNT30308418	Lolium perenne	Triticum aestivum	99.33	61.72	88.99	445	forward
CNT30400472	Lolium perenne	Triticum turgidum	98.66	44.33	89.59	442	forward
CNT30559890	Lolium perenne	Actinidia chinensis	41.29	27.09	84.86	185	forward
CNT30234460	Lolium perenne	Brassica oleracea	59.38	37.84	81.2	266	forward
CNT30508941	Lolium perenne	Solanum lycopersicum	52.01	58.69	80.26	233	forward
CNT30554580	Lolium perenne	Oryza glaberrima	94.64	62.35	86.32	424	forward
CNT30145737	Lolium perenne	Medicago truncatula	58.71	42.69	80.61	263	forward
CNT30443444	Lolium perenne	Aegilops tauschii	95.09	45.76	89.2	426	forward
CNT30256655	Lolium perenne	Avena sativa	90.62	90.42	92.36	406	forward
CNT30668234	Lolium perenne	Triticum dicoccoides	36.16	27.55	91.36	162	forward
CNT30312353	Lolium perenne	Camelina sativa	56.03	61.22	82.07	251	forward
CNT3062262	Lolium perenne	Arabidopsis lyrata	52.68	43.07	83.47	236	forward
CNT3079663	Lolium perenne	Brassica juncea	60.04	50.56	81.04	269	forward
CNT30263848	Lolium perenne	Brassica rapa	60.04	63.59	81.78	269	forward
CNT30468540	Lolium perenne	Saccharum spontaneum	99.33	51.39	85.62	445	forward
CNT3016767	Lolium perenne	Zea mays	95.31	56.48	82.2	427	forward
CNT30608057	Lolium perenne	Gossypium raimondii	50.67	38.28	81.94	227	forward
CNT30216750	Lolium perenne	Kalanchoe fedtschenkoi	35.71	32.65	86.25	160	forward
CNT3067990	Lolium perenne	Leersia perrieri	75.45	88.71	83.43	338	forward
CNT30205386	Lolium perenne	Helianthus annuus	66.07	41.4	81.08	296	forward
CNT30688162	Lolium perenne	Triticum urartu	94.87	63.24	86.59	425	forward
CNT30350937	Lolium perenne	Eragrostis tef	103.79	84.09	83.23	465	forward
CNT30476898	Lolium perenne	Arabidopsis halleri	57.37	55.75	82.1	257	forward
CNT30366537	Lolium perenne	Sorghum bicolor	99.33	51.03	83.82	445	forward
CNT30620243	Lolium perenne	Cajanus cajan	46.65	62.95	82.3	209	forward
CNT30596736	Lolium perenne	Oryza meridionalis	94.64	56.16	86.79	424	forward
CNT30354623	Lolium perenne	Lactuca sativa	42.63	29.8	84.29	191	forward
CNT30370935	Lolium perenne	Oryza glumipatula	100	46.28	85.94	448	forward
CNT30154770	Lolium perenne	Prunus persica	58.71	74.93	80.23	263	forward
CNT30408809	Lolium perenne	Papaver somniferum	52.68	27.31	81.36	236	forward
CNT30574166	Lolium perenne	Vitis vinifera	58.04	60.61	80.77	260	forward
CNT3027914	Lolium perenne	Theobroma cacao	21.21	31.77	90.53	95	forward
CNT3051702	Lolium perenne	Amborella trichopoda	54.02	39.54	80.99	242	forward
CNT30149777	Lolium perenne	Brachypodium distachyon	99.33	48.32	89.44	445	forward
CNT30103004	Lolium perenne	Oryza rufipogon	99.33	44.63	83.82	445	forward
CNT30577473	Lolium perenne	Oryza barthii	68.53	56.33	87.3	307	forward
CNT30584443	Lolium perenne	Echinochloa crusgalli	92.86	60.03	85.34	416	forward
CNT30497905	Lolium perenne	Digitaria exilis	96.65	47.95	84.53	433	forward
CNT30176441	Lolium perenne	Vigna angularis	66.96	49.59	81	300	forward
CNT30558075	Lolium perenne	Panicum hallii	99.33	56.4	86.29	445	forward
CNT30551544	Lolium perenne	Oryza brachyantha	62.72	40.43	86.83	281	forward

Expression of CNT30141877

Peptides detected in this lncRNA

>peptide 1 (43 aa)
GCLESKHVKDCTWPKKDCSSVKLDCNSAKLGYSWETSGCSRAM*

>peptide 2 (67 aa)
MMATSGYKMVMLGCKMATSGCMQEMSGYMLERLGYKLAMWGCSSAMWGCSLAMWGCSSAMWGCSSAM*

Sequence

>CNT30141877
GGCTGCTTGGAGAGTAAGCATGTGAAGGACTGTACTTGGCCGAAGAAGGATTGTAGCTCGGTGAAGTTGGACTGTAATTCGGCGAAGTTGGGCTATAGCT
GGGAGACGTCGGGCTGTAGCCGGGCGATGTAGGGCTGTATGCAGGCGATGTTGGGCTGTATGAGGGCGATGTAGGGCTGTATGATGGAGATGTAGGGCTG
TATGAAGGAGACGTGGGGCTGTATGATGGAGATGTAGGACTGTATGATGGCGACGTCGGGCTATAAGATGGTGATGTTGGGCTGTAAGATGGCGACGTCG
GGCTGTATGCAGGAGATGTCGGGCTATATGCTGGAGAGGTTGGGCTATAAACTGGCGATGTGGGGCTGTAGCTCGGCGATGTGGGGCTGTAGCTTGGCGA
TGTGGGGCTGTAGCTCGGCGATGTGGGGCTGTAGCTCGGCGATGTAGG