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Detailed information on CNT30620243

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30523536	Cajanus cajan	Setaria italica	62.05	36.46	81.55	206	forward
CNT30316008	Cajanus cajan	Corylus avellana	69.28	35.17	80.87	230	forward
CNT30700558	Cajanus cajan	Quercus lobata	38.55	47.41	85.16	128	forward
CNT30616399	Cajanus cajan	Sesamum indicum	66.57	30.87	85.07	221	forward
CNT3021339	Cajanus cajan	Citrullus lanatus	65.36	34.23	82.95	217	forward
CNT30727660	Cajanus cajan	Corchorus capsularis	70.18	42.6	81.55	233	forward
CNT30628927	Cajanus cajan	Vigna unguiculata	70.78	41.96	86.81	235	forward
CNT30710559	Cajanus cajan	Glycine max	100.3	50.45	85.59	333	forward
CNT3091361	Cajanus cajan	Solanum tuberosum	77.41	34.97	80.93	257	forward
CNT30307041	Cajanus cajan	Triticum aestivum	63.86	39.55	82.08	212	forward
CNT30400271	Cajanus cajan	Triticum turgidum	63.86	42.83	82.08	212	forward
CNT30559890	Cajanus cajan	Actinidia chinensis	71.69	34.85	83.19	238	forward
CNT3087924	Cajanus cajan	Vigna radiata	85.54	93.42	88.03	284	forward
CNT30554580	Cajanus cajan	Oryza glaberrima	62.95	30.74	81.82	209	forward
CNT30443444	Cajanus cajan	Aegilops tauschii	62.95	22.45	84.21	209	forward
CNT30256659	Cajanus cajan	Avena sativa	69.28	32.17	81.3	230	forward
CNT30668234	Cajanus cajan	Triticum dicoccoides	46.69	26.36	83.23	155	forward
CNT30312353	Cajanus cajan	Camelina sativa	71.99	58.29	80.75	239	forward
CNT30468540	Cajanus cajan	Saccharum spontaneum	64.76	24.83	81.86	215	forward
CNT30141877	Cajanus cajan	Lolium perenne	62.95	46.65	82.3	209	forward
CNT3017147	Cajanus cajan	Zea mays	53.92	25.03	83.8	179	forward
CNT3067990	Cajanus cajan	Leersia perrieri	67.47	58.79	82.59	224	forward
CNT30713436	Cajanus cajan	Malus domestica golden	42.77	44.1	82.39	142	forward
CNT30625810	Cajanus cajan	Daucus carota	45.78	22.42	82.89	152	forward
CNT30687113	Cajanus cajan	Triticum urartu	53.92	33.65	84.92	179	forward
CNT30341749	Cajanus cajan	Eragrostis tef	53.01	39.55	85.8	176	forward
CNT30366537	Cajanus cajan	Sorghum bicolor	62.05	23.62	83.01	206	forward
CNT30596736	Cajanus cajan	Oryza meridionalis	78.92	34.7	81.68	262	forward
CNT30154708	Cajanus cajan	Prunus persica	69.28	69.91	80.43	230	forward
CNT3027877	Cajanus cajan	Theobroma cacao	61.14	51.39	85.22	203	forward
CNT3051605	Cajanus cajan	Amborella trichopoda	64.76	32.43	80	215	forward
CNT30109704	Cajanus cajan	Oryza longistaminata	30.42	18.17	86.14	101	forward
CNT3035160	Cajanus cajan	Cucumis melo	41.27	27.18	83.21	137	forward
CNT30150463	Cajanus cajan	Brachypodium distachyon	72.89	27.53	82.64	242	forward
CNT30584443	Cajanus cajan	Echinochloa crusgalli	63.86	30.59	83.02	212	forward
CNT30497905	Cajanus cajan	Digitaria exilis	62.95	23.15	82.3	209	forward
CNT30558075	Cajanus cajan	Panicum hallii	54.82	23.07	84.07	182	forward
CNT30551544	Cajanus cajan	Oryza brachyantha	72.89	34.82	81.82	242	forward
CNT3049385	Cajanus cajan	Cucumis sativus	61.14	25.63	82.27	203	forward

Expression of CNT30620243

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MEKLGYTMEMLGYMRVMLGCMRVMLGCIQETWGCMQEMWGCMQVRWGYSWEMWDYSSVMWDCSSVMWDCS*

Sequence

>CNT30620243
AGACAATCTTGGACTGCTTGGAGAATATGCTAATGAAGGACTATACTTTGCTGACTGTGGATTGTAACTAGGGGAAGTAGGACTATACGATGGAGAAGTT
GGGCTATACGATGGAGATGTTGGGCTATATGAGGGTGATGTTGGGCTGTATGAGGGTGATGTTGGGCTGTATCCAGGAGACGTGGGGCTGTATGCAGGAG
ATGTGGGGCTGTATGCAGGTGAGGTGGGGCTATAGCTGGGAGATGTGGGACTATAGCTCGGTGATGTGGGACTGTAGCTCGGTGATGTGGGACTGTAGCT
AGGGGACGTGGGAGAGTAGGATGGACTGGTAG