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Detailed information on CNT3041219

BLAST search results

BLAST vs Swiss-Prot:
sp|P84549|TBA_POPEU, E-value = 3e-15

BLAST vs NONCODE:
NONGMAT000220, E-value = 8e-18

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30692533	Chlamydomonas reinhardtii	Oryza sativa	37.89	30.95	90.74	216	forward
CNT30677979	Chlamydomonas reinhardtii	Setaria viridis	38.42	23.08	92.69	219	forward
CNT30522101	Chlamydomonas reinhardtii	Setaria italica	38.42	20.66	93.15	219	forward
CNT30640127	Chlamydomonas reinhardtii	Nymphaea colorata	57.72	41.23	81.46	329	forward
CNT30533600	Chlamydomonas reinhardtii	Eucalyptus grandis	31.4	47.86	89.39	179	forward
CNT30547493	Chlamydomonas reinhardtii	Ipomoea triloba	37.89	19.32	86.11	216	forward
CNT30371538	Chlamydomonas reinhardtii	Arabidopsis thaliana	26.67	32	83.55	152	forward
CNT30501067	Chlamydomonas reinhardtii	Coffea canephora	28.07	22.13	85	160	forward
CNT30618173	Chlamydomonas reinhardtii	Sesamum indicum	38.07	27.36	82.95	217	forward
CNT30727924	Chlamydomonas reinhardtii	Corchorus capsularis	34.39	20.5	83.67	196	forward
CNT3071007	Chlamydomonas reinhardtii	Quercus suber	24.56	27.4	85	140	forward
CNT30379210	Chlamydomonas reinhardtii	Manihot esculenta	35.79	37.85	85.29	204	forward
CNT30507454	Chlamydomonas reinhardtii	Nicotiana attenuata	27.54	24.19	84.71	157	forward
CNT30712730	Chlamydomonas reinhardtii	Glycine max	36.67	40.82	82.3	209	forward
CNT3098615	Chlamydomonas reinhardtii	Solanum tuberosum	26.67	29.63	86.18	152	forward
CNT30184570	Chlamydomonas reinhardtii	Secale cereale	38.42	34.54	89.5	219	forward
CNT30295408	Chlamydomonas reinhardtii	Triticum aestivum	38.42	35.32	88.58	219	forward
CNT30224141	Chlamydomonas reinhardtii	Hordeum vulgare	32.46	27.21	90.81	185	forward
CNT30391523	Chlamydomonas reinhardtii	Triticum turgidum	38.42	29.72	89.04	219	forward
CNT3086234	Chlamydomonas reinhardtii	Vigna radiata	23.68	25.47	82.96	135	forward
CNT30555281	Chlamydomonas reinhardtii	Oryza glaberrima	37.89	26.09	92.13	216	forward
CNT30439881	Chlamydomonas reinhardtii	Aegilops tauschii	38.42	28.55	88.58	219	forward
CNT30249355	Chlamydomonas reinhardtii	Avena sativa	38.42	29.12	90.87	219	forward
CNT30662251	Chlamydomonas reinhardtii	Triticum dicoccoides	38.42	32.3	89.04	219	forward
CNT3075301	Chlamydomonas reinhardtii	Brassica juncea	24.21	25.99	84.06	138	forward
CNT30265526	Chlamydomonas reinhardtii	Brassica rapa	37.37	21.45	82.16	213	forward
CNT30445850	Chlamydomonas reinhardtii	Saccharum spontaneum	38.42	24.07	90.41	219	forward
CNT30136973	Chlamydomonas reinhardtii	Lolium perenne	34.04	46.19	89.18	194	forward
CNT30953	Chlamydomonas reinhardtii	Zea mays	38.77	23.36	88.24	221	forward
CNT30606894	Chlamydomonas reinhardtii	Gossypium raimondii	35.61	55.62	79.8	203	forward
CNT30229091	Chlamydomonas reinhardtii	Ananas comosus	42.11	67.04	80	240	forward
CNT30219368	Chlamydomonas reinhardtii	Kalanchoe fedtschenkoi	35.61	34.76	84.73	203	forward
CNT30208739	Chlamydomonas reinhardtii	Helianthus annuus	26.67	38.48	84.87	152	forward
CNT30716299	Chlamydomonas reinhardtii	Malus domestica golden	37.19	34.93	81.13	212	forward
CNT30689745	Chlamydomonas reinhardtii	Triticum urartu	38.42	28.74	86.76	219	forward
CNT30721298	Chlamydomonas reinhardtii	Triticum spelta	21.23	37.23	88.43	121	forward
CNT30361562	Chlamydomonas reinhardtii	Sorghum bicolor	38.77	22.35	90.5	221	forward
CNT30597072	Chlamydomonas reinhardtii	Oryza meridionalis	37.72	29.61	91.16	215	forward
CNT30360852	Chlamydomonas reinhardtii	Lactuca sativa	31.23	32.42	84.27	178	forward
CNT30371350	Chlamydomonas reinhardtii	Oryza glumipatula	61.4	42.68	88.57	350	forward
CNT30482824	Chlamydomonas reinhardtii	Chara braunii	27.54	20.63	85.99	157	forward
CNT30570163	Chlamydomonas reinhardtii	Vitis vinifera	38.42	26.45	81.74	219	forward
CNT30148523	Chlamydomonas reinhardtii	Brachypodium distachyon	37.37	33.02	86.85	213	forward
CNT30103809	Chlamydomonas reinhardtii	Oryza rufipogon	37.89	29.71	92.13	216	forward
CNT30578286	Chlamydomonas reinhardtii	Oryza barthii	37.89	22.5	92.13	216	forward
CNT30582828	Chlamydomonas reinhardtii	Echinochloa crusgalli	37.89	25.17	89.81	216	forward
CNT30117950	Chlamydomonas reinhardtii	Oryza nivara	37.89	26.06	92.13	216	forward
CNT30593783	Chlamydomonas reinhardtii	Eragrostis curvula	24.56	26.52	90.71	140	forward
CNT30174517	Chlamydomonas reinhardtii	Vigna angularis	27.89	79.1	82.39	159	forward
CNT30558847	Chlamydomonas reinhardtii	Panicum hallii	31.93	24.66	92.86	182	forward
CNT30724701	Chlamydomonas reinhardtii	Lupinus angustifolius	37.19	18.78	82.08	212	forward
CNT3040082	Chlamydomonas reinhardtii	Marchantia polymorpha	36.32	49.29	80.19	207	forward

Expression of CNT3041219

Peptides detected in this lncRNA

>peptide 1 (87 aa)
GDHAHGALHLGQVTAGHDGGGLVVDAALEAGGAPVDELDGALGLDGGHRGVDVLGHHVTAVHQAAGHVLAVAGMMGAYELSMKWMRG*

>peptide 2 (49 aa)
MPHLKPVGHQSTNWMVRLVLMVATEALTSLGTTSPRYIRQQAMYLPWRG*

Sequence

>CNT3041219
GGAGATCATGCACACGGCGCGCTGCACCTTGGCCAGGTCACCGCCGGGCACGACGGTGGGGGGCTGGTAGTTGATGCCGCACTTGAAGCCGGTGGGGCAC
CAGTCGACGAACTGGATGGTGCGCTTGGTCTTGATGGTGGCCACCGAGGCGTTGACGTCCTTGGGCACCACGTCACCGCGGTACATCAGGCAGCAGGCCA
TGTACTTGCCGTGGCGGGGATGATGGGCGCGTACGAGCTGAGCATGAAGTGGATGCGGGGGTAGGGCACCAGGTTGGTCTGGAACTCGGTGATATCCACG
TTCAGGGCACCGTCGAAGCGCAGCGAGGCGGTCAGCGACGAGATGACCTGGGCGATCAGGCGGTTCAGGTTGGTGTAGGTGGGGCGCTCAATGTCCAGGG
AGCGGCGGCAGATGTCGTAGATGGCCTCGTTGTCGAGCATCACGGCGACATCGGTGTGCTCCAGCAGGGAGTGGGTGGACAGCACCGAGTTGTAGGGCTC
GACGACGGCGGTCGACACCTGGGGCGAGGGGTAGACGGTGAAGCCCAGCTTGGACTTCTTGCCGTAGTCC