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Detailed information on CNT30716299


BLAST search results

BLAST vs Swiss-Prot:
sp|P33629|TBA_PRUDU, E-value = 5e-128

BLAST vs NONCODE:
NONGMAT000220, E-value = 7e-74

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640127Malus domestica goldenNymphaea colorata53.3840.687.35324forward
CNT30317272Malus domestica goldenCorylus avellana33.9452.9688.35206forward
CNT30729860Malus domestica goldenCorchorus capsularis68.3744.8686.02415forward
CNT3071006Malus domestica goldenQuercus suber50.4163.3583.99306forward
CNT30712809Malus domestica goldenGlycine max55.1910085.67335forward
CNT30435344Malus domestica goldenAegilops tauschii26.6952.0984.57162forward
CNT3059767Malus domestica goldenArabidopsis lyrata20.2617.3584.55123forward
CNT30135921Malus domestica goldenLolium perenne32.4552.3989.34197forward
CNT3065Malus domestica goldenZea mays35.5888.5288.89216forward
CNT3041219Malus domestica goldenChlamydomonas reinhardtii34.9337.1981.13212forward
CNT30606894Malus domestica goldenGossypium raimondii59.6499.1885.91362forward
CNT30648424Malus domestica goldenRosa chinensis33.4463.2489.66203forward
CNT30129276Malus domestica goldenCorymbia citriodora30.6444.588.71186forward
CNT30719750Malus domestica goldenTriticum spelta38.8899.1686.44236forward
CNT30579614Malus domestica goldenEchinochloa crusgalli34.7653.4290.05211forward
CNT30726253Malus domestica goldenLupinus angustifolius59.899.7385.12363forward
CNT3040082Malus domestica goldenMarchantia polymorpha49.9272.1481.52303forward

Expression of CNT30716299

Peptides detected in this lncRNA

>peptide 1 (43 aa)
LRHKAVEVGVGGSLNVKRAPADIIDSLVVKEHCNISVFQEGVG*

>peptide 2 (29 aa)
MLASSSFTEEGVEGIITSTDGLVTRHLAIR

>peptide 3 (43 aa)
MTVGSRSTNTARGTCLPAPVSLKKVLKASSPPPMVLSLGIWPSG

Sequence

>CNT30716299
CTGAGACACAAGGCGGTTGAGGTTGGTGTAGGTGGGTCGCTCAATGTCAAGAGAGCGCCTGCAGATATCATAGATAGCCTCGTTGTCAAGGAGCACTGCA
ACATCAGTGTGTTCCAGGAGGGAGTGGGTTGAGAGGACACTGTTGTAGGGCTCAACCACAGATGTAGAAACCTGTGGAGATGGATACACGGTGAACCCAA
GCTTTGACTTCTTTCCATAGTCAACAGAGAGACGCTCCAAAAGAAGGGACCCAAGACCAGAGCCAGTTCCTCCACCAACAGCATTGAAAACAAGGAACCC
TTGAAGCCCAGTGCAGTTGTCAGCAAGTTTACGGATGCGGTCCAAGCAGAGATCAACAATCTCCTTGCCGATGGTGTAGTGACCACGGGCAAAGTTGTTG
GCAGCATCTTCCTTGCCACTAATGAGTTGCTCAGGGTGGAAGAGCTGGCGGTAAGTTCCGGTCCTCACTTCATCAATGACAGTGGGCTCAAGATCAACAA
ACACAGCGCGAGGCACATGCTTGCCAGCTCCAGTTTCACTGAAGAAGGTGTTGAAGGCATCATCACCTCCACCGATGGTCTTGTCACTAGGCATTTGGCC
ATCAGGC