« Back to Oryza nivara search


Detailed information on CNT30117950


BLAST search results

BLAST vs Swiss-Prot:
sp|Q53M52|TBA2_ORYSJ, E-value = 1e-117

BLAST vs NONCODE:
NONGMAT000219, E-value = 3e-49

Expression of CNT30117950

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MPHLNPVGHQSTNWMVRFVLMVATAAFTSLGTTSPRYIRQHAMYLPWRGSHLAIMEDGSKALLVISATESCSW*

>peptide 2 (61 aa)
GFVLRQTTHLDIKDATKKVHINNTGHSSESYKQTLHNRKANVFQNQTHKLIDRSPHGQIIG*

>peptide 3 (41 aa)
MRSNLMSMRENTSTTLVELEIMHTALCTLARSPPGTTLGGW*

Sequence

>CNT30117950
GGCTTCGTTTTACGACAAACCACTCACTTGGATATTAAAGATGCCACAAAGAAGGTTCACATAAACAACACAGGTCACAGCAGCGAAAGCTACAAGCAAA
CCCTGCATAATCGAAAAGCAAATGTTTTTCAAAACCAGACACACAAACTGATAGATAGAAGCCCACACGGACAGATCATAGGATAGCAGCAGTAATCAAG
CATTGCCAAGGCACCAGGCAAGAACCCTGAACCTCTCTAGTACTCGTCACCCTCATCACCCTCGTCACCATCGTCGAACTCGGAGCCGACCTCCTCGTAG
TCCTTCTCCAGCGCGCTTGGAGTACATGAGGTCGAACTTGATGTCGATGCGGGAGAACACCTCGACGACGCTGGTGGAGTTGGAGATCATGCACACGGCC
CTCTGCACCTTGGCCAGGTCTCCCCCCGGGACGACGCTGGGCGGCTGGTAGTTGATGCCGCACTTGAACCCCGTGGGGCACCAGTCCACGAACTGGATGG
TGCGCTTCGTCTTGATGGTGGCCACCGCGGCGTTCACGTCCTTGGGGACCACGTCGCCGCGGTACATCAGGCAGCACGCCATGTACTTGCCGTGGCGCGG
GTCGCACTTGGCCATCATGGAGGACGGCTCGAAGGCGCTGTTGGTGATCTCCGCCACGGAGAGCTGCTCGTGGTAGGCCTTCTCGGCCGAGATCACCGGG
GCGTAGGAGGAAAGCATGAAGTGGATCCTCGGGTAGGGCACCAGGTTGGTCTGGAACTCGTTGACATCCACATTCAGAGCACCATCGAACCTCAGGGAGG
CAGTCAGTGAGGAGATGACCTGCAGCACA