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Detailed information on CNT30379210


BLAST search results

BLAST vs Swiss-Prot:
sp|P33629|TBA_PRUDU, E-value = 2e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3075301Manihot esculentaBrassica juncea33.2133.7191.06179forward
CNT3041219Manihot esculentaChlamydomonas reinhardtii37.8535.7985.29204forward
CNT30219368Manihot esculentaKalanchoe fedtschenkoi42.6739.3886.96230forward
CNT30720142Manihot esculentaTriticum spelta26.3539.6691.55142forward
CNT30593783Manihot esculentaEragrostis curvula34.3235.0483.24185forward

Expression of CNT30379210

Peptides detected in this lncRNA

>peptide 1 (37 aa)
LKMNKTRGKKQHASYAKEIKHHRNFLIFFIFTIIALS*

>peptide 2 (32 aa)
MVRLVLIVATAAFTSLGTTSPRYIKQQAMYLP*

Sequence

>CNT30379210
CTCAAAATGAACAAAACACGGGGAAAAAAGCAGCACGCATCATATGCTAAAGAGATAAAGCACCACAGGAACTTCTTAATATTCTTCATCTTCACCATCA
TCGCCCTCAGCTGATTCAGCACCAACCTCTTCATAATCCTTTTCAAGGGCAGCAAGATCCTCACGAGCCTCAGAGAACTCTCCTTCCTCCCCTCACCCAC
ATACCAGTGCACAAAAGCACGCTTAGCATACATGAGGTCAAACTTGTGGTCAATTCTTGAGAACACCTCAGCAACACTGGTCGAGTTGGAGATCATGCAC
ACAGCCCTCTGAACCTTGGCAAGGTCACCGCCAGGAACAACAGTGGGTGGCTGGTAGTTGATACCGCACTTGAATCCAGTTGGGCACCAGTCAACAAACT
GAATGGTGCGCTTGGTCTTAATAGTGGCAACTGCAGCATTCACATCCTTGGGCACAACATCACCACGGTACATCAAGCAGCAGGCCATGTATTTACCATG
ACGAGGATCACACTTGGCCATCATAGAAGAGGGCTCAAA