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Detailed information on CNT30547493


BLAST search results

BLAST vs Swiss-Prot:
sp|P33629|TBA_PRUDU, E-value = 0.0

BLAST vs NONCODE:
NONGMAT000220, E-value = 1e-42

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692533Ipomoea trilobaOryza sativa28.0944.9987.58314forward
CNT30678108Ipomoea trilobaSetaria viridis54.3866.9686.84608forward
CNT30522101Ipomoea trilobaSetaria italica75.6779.8183.45846forward
CNT30640127Ipomoea trilobaNymphaea colorata24.2433.9685.61271forward
CNT30533600Ipomoea trilobaEucalyptus grandis29.1687.1790.18326forward
CNT30517711Ipomoea trilobaJuglans regia19.3240.7588.89216forward
CNT30702815Ipomoea trilobaQuercus lobata14.6744.5785.98164forward
CNT30371538Ipomoea trilobaArabidopsis thaliana38.7391.1684.53433forward
CNT30501067Ipomoea trilobaCoffea canephora58.4190.3285.91653forward
CNT30618173Ipomoea trilobaSesamum indicum25.0435.3186.79280forward
CNT30729860Ipomoea trilobaCorchorus capsularis42.6751.5787477forward
CNT3071007Ipomoea trilobaQuercus suber33.7273.7885.68377forward
CNT30379228Ipomoea trilobaManihot esculenta47.4160.7887.55530forward
CNT30403515Ipomoea trilobaBeta vulgaris21.292.2287.34237forward
CNT30709081Ipomoea trilobaGlycine max66.9199.4782.75748forward
CNT3098615Ipomoea trilobaSolanum tuberosum22.4548.9386.45251forward
CNT30177336Ipomoea trilobaSecale cereale79.1677.2385.42885forward
CNT30294619Ipomoea trilobaTriticum aestivum53.0470.4387.52593forward
CNT30224141Ipomoea trilobaHordeum vulgare30.2349.7185.8338forward
CNT30391405Ipomoea trilobaTriticum turgidum3957.4487.16436forward
CNT3085161Ipomoea trilobaVigna radiata28.3545.2285.8317forward
CNT30555384Ipomoea trilobaOryza glaberrima37.6649.2484.8421forward
CNT30439881Ipomoea trilobaAegilops tauschii39.858.0287.42445forward
CNT30249355Ipomoea trilobaAvena sativa40.1659.7189.09449forward
CNT30655883Ipomoea trilobaTriticum dicoccoides48.0375.2186.96537forward
CNT3059767Ipomoea trilobaArabidopsis lyrata21.2933.5785.71238forward
CNT3075301Ipomoea trilobaBrassica juncea16.8235.489.36188forward
CNT30265526Ipomoea trilobaBrassica rapa41.2346.4288.29461forward
CNT30445643Ipomoea trilobaSaccharum spontaneum50.7263.9285.19567forward
CNT30136973Ipomoea trilobaLolium perenne18.2548.5791.18204forward
CNT30953Ipomoea trilobaZea mays42.0449.6886.81470forward
CNT3041219Ipomoea trilobaChlamydomonas reinhardtii19.3237.8986.11216forward
CNT30606894Ipomoea trilobaGossypium raimondii25.9479.4584.14290forward
CNT30229012Ipomoea trilobaAnanas comosus21.2928.7185.71238forward
CNT30219368Ipomoea trilobaKalanchoe fedtschenkoi20.3939.0486.4228forward
CNT30208739Ipomoea trilobaHelianthus annuus19.0553.9287.32213forward
CNT30716286Ipomoea trilobaMalus domestica golden30.2325.8885.5338forward
CNT30624589Ipomoea trilobaDaucus carota9.320.9790.38104forward
CNT30689745Ipomoea trilobaTriticum urartu39.2757.6187.02439forward
CNT30362155Ipomoea trilobaSorghum bicolor64.5866.1882.55722forward
CNT30597072Ipomoea trilobaOryza meridionalis30.2346.5684.32338forward
CNT30371316Ipomoea trilobaOryza glumipatula35.9634.0784.83402forward
CNT30482824Ipomoea trilobaChara braunii22.7233.3882.28254forward
CNT30430260Ipomoea trilobaPapaver somniferum18.6935.9188.04209forward
CNT30570163Ipomoea trilobaVitis vinifera35.0647.3484.95392forward
CNT3052700Ipomoea trilobaAmborella trichopoda27.3796.8482.68306forward
CNT3024728Ipomoea trilobaPopulus trichocarpa24.0633.1388.85269forward
CNT30104125Ipomoea trilobaOryza rufipogon42.435.8884.81474forward
CNT30582828Ipomoea trilobaEchinochloa crusgalli48.0362.5986.22537forward
CNT30117821Ipomoea trilobaOryza nivara45.2645.6385.18506forward
CNT30593783Ipomoea trilobaEragrostis curvula17.0836.1785.34191forward
CNT30724701Ipomoea trilobaLupinus angustifolius46.1545.786.05516forward

Expression of CNT30547493

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRSNLWSMRENTSATLVELEIMQTALCTLARSPPGTTVGGW*

>peptide 2 (44 aa)
MNPWVGHKVVIGWALNVKGAAADVINGLIVKKNCHISVLEKGMG*

>peptide 3 (37 aa)
MASLSRRTATSVCSRREWVDRTLLYGSTTEVETWGEG*

>peptide 4 (59 aa)
MVRLVLMVATAAFTSLGTTSPRNIRQHAMYLPWRGSHLTIIDDGSKALLVISATESCSW*

>peptide 5 (94 aa)
MVNAREHLRNAGGVGDHANSPLHLGKIASGNDSWWLVVDTALESSWAPIHKLDGTLGLDGSHSSVHVLGHHITTEHQAACHVFAVARVALDHHR*

Sequence

>CNT30547493
AAGAAAATGGCTAGGTGCCAATTTCATACGAGAATAATTGTTGTTCTCCAAACCAGAACCAAATATTAAGAGAGTACACATATCACAAGGAAGACGGGCA
GACATTACACAAACACTAGTAGTAGTAGTCACGGTGGGAACAGAAAGCAAACAAACATAGACAGATAGTCTTCATCATCGCCATCATCTCCTTCGTCCAT
CTCAGCACCAACCTCCTCATAGTCTTTCTCCAGGGCAGCAAGATCCTCACGAGCTTCACTGAATTCTCCTTCCTCCATACCCTCACCAACATACCAGTGC
ACGAAAGCACGCTTGCAGTACATGAGGTCGAACTTATGGTCAATGCGAGAGAACACCTCCGCAACGCTGGTGGAGTTGGAGATCATGCAAACAGCCCTCT
GCACCTTGGCAAGATCGCCTCCGGGAACGACAGTTGGTGGCTGGTAGTTGATACCGCACTTGAATCCAGTTGGGCACCAATCCACAAACTGGATGGTACG
CTTGGTCTTGATGGTAGCCACAGCAGCGTTCACGTCCTTGGGCACCACATCACCACGGAACATCAGGCAGCATGCCATGTATTTGCCGTGGCGAGGGTCG
CACTTGACCATCATAGATGATGGCTCAAAAGCACTGTTGGTGATCTCAGCAACAGAGAGTTGTTCATGGTAGGCTTTCTCAGCTGATATGACAGGGGCAT
ATGAGGAAAGCATGAAATGAATCCTTGGGTAGGGCACAAGGTTGTGATAGGTTGGGCGCTCAATGTCAAGGGAGCGGCGGCAGATGTCATAAATGGCCTC
ATTGTCAAGAAGAACTGCCACATCAGTGTGCTCGAGAAGGGAATGGGTTGACAGGACACTGTTGTATGGCTCAACAACAGAGGTTGAAACCTGGGGTGAA
GGGTAAATGGTGAAACCAAGTTTTGATTTCTTTCCATAGTCAACAGAGAGACGCTCAAGCAGAAGAGATCCCAGGCCTGAACCAGTGCCTCCACCCACAG
CATTGAAGACAAGAAATCCTTGAAGACCAGTGCAGTTGTCAGCAAGTTTACGGATCCTATCCAAGCAAAGATCAACAATCTCCTTCCCAACTGCACACAT
ACCAAGCAGACAGAGAAC