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Detailed information on CNT30136973


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692533Lolium perenneOryza sativa88.8153.4484.18373forward
CNT30522101Lolium perenneSetaria italica56.4322.3690.3237forward
CNT30533600Lolium perenneEucalyptus grandis57.8664.9788.89243forward
CNT30547493Lolium perenneIpomoea triloba48.5718.2591.18204forward
CNT30517711Lolium perenneJuglans regia23.5718.6889.999forward
CNT30371538Lolium perenneArabidopsis thaliana56.6750.1187.82238forward
CNT30501067Lolium perenneCoffea canephora48.5728.2289.22204forward
CNT30618173Lolium perenneSesamum indicum93.5749.5684.73393forward
CNT30727924Lolium perenneCorchorus capsularis57.1425.189.17240forward
CNT3071007Lolium perenneQuercus suber46.1937.9686.6194forward
CNT30379228Lolium perenneManihot esculenta57.6227.7588.84242forward
CNT30507454Lolium perenneNicotiana attenuata54.7635.4488.7230forward
CNT30712730Lolium perenneGlycine max88.8172.8583.91373forward
CNT3098615Lolium perenneSolanum tuberosum48.3339.5790.15203forward
CNT30184570Lolium perenneSecale cereale57.8638.3393.83243forward
CNT30284381Lolium perenneTriticum aestivum93.3351.3192.09392forward
CNT30224141Lolium perenneHordeum vulgare39.5224.4185.54166forward
CNT30391559Lolium perenneTriticum turgidum89.5259.1294.41376forward
CNT3085161Lolium perenneVigna radiata54.7632.8186.09230forward
CNT30555352Lolium perenneOryza glaberrima93.143.2586.7391forward
CNT30144688Lolium perenneMedicago truncatula22.8627.0487.596forward
CNT30435101Lolium perenneAegilops tauschii73.5710093.53309forward
CNT30247087Lolium perenneAvena sativa50.9529.2396.73214forward
CNT30655738Lolium perenneTriticum dicoccoides76.4347.790.65321forward
CNT3075301Lolium perenneBrassica juncea25.4820.1588.79107forward
CNT30265526Lolium perenneBrassica rapa54.7623.1685.65230forward
CNT30445643Lolium perenneSaccharum spontaneum56.4326.7289.45237forward
CNT30953Lolium perenneZea mays56.4325.0588.61237forward
CNT3041219Lolium perenneChlamydomonas reinhardtii46.1934.0489.18194forward
CNT30229012Lolium perenneAnanas comosus21.6710.9887.9191forward
CNT30219368Lolium perenneKalanchoe fedtschenkoi49.7635.7988.04209forward
CNT30208739Lolium perenneHelianthus annuus74.2978.9985.9312forward
CNT30689745Lolium perenneTriticum urartu90.2449.7494.2379forward
CNT30721298Lolium perenneTriticum spelta3038.7796.83126forward
CNT30340361Lolium perenneEragrostis tef28.122.5691.53118forward
CNT30361562Lolium perenneSorghum bicolor55.4823.5689.27233forward
CNT30597072Lolium perenneOryza meridionalis57.8633.4787.65243forward
CNT30356256Lolium perenneLactuca sativa26.921.8183.19113forward
CNT30371316Lolium perenneOryza glumipatula57.8620.5987.24243forward
CNT30570163Lolium perenneVitis vinifera57.8629.3587.65243forward
CNT3056297Lolium perenneAmborella trichopoda19.5225.5584.1582forward
CNT30106557Lolium perenneOryza longistaminata29.0557.0190.98122forward
CNT3024735Lolium perennePopulus trichocarpa25.4819.8186.92107forward
CNT30119652Lolium perenneCitrus clementina43.8124.1581.52184forward
CNT30148523Lolium perenneBrachypodium distachyon33.3321.7188.57140forward
CNT30103952Lolium perenneOryza rufipogon93.142.0986.96391forward
CNT30578286Lolium perenneOryza barthii57.8625.3187.24243forward
CNT30582828Lolium perenneEchinochloa crusgalli56.4327.6290.3237forward
CNT30117950Lolium perenneOryza nivara57.8629.3187.24243forward
CNT30558847Lolium perennePanicum hallii54.2930.8991.67228forward
CNT30333509Lolium perenneCynara cardunculus25.2419.2785.85106forward
CNT30726291Lolium perenneLupinus angustifolius57.6230.8787.19242forward

Expression of CNT30136973

Peptides detected in this lncRNA

>peptide 1 (86 aa)
LDLGKVTTWDNAGWLVVDTTLEASGAPVHKLDSALGLDGGHSSVHILGHNITTVHQAAGHVLAVAGVTLCHHRGRLKSTVAEITGA*

>peptide 2 (53 aa)
MVATAAFTSLGTTSPRYIRQQAMYLPWRGSHFAIIEEGSKALLLRSLGRRRKA*

Sequence

>CNT30136973
CTCTGGACCTTGGCAAGGTCACCACCTGGGACAACGCTGGGTGGCTGGTAGTTGATACCACACTTGAAGCCAGTGGGGCACCAGTCCACAAACTGGATAG
TGCGCTTGGTCTTGATGGTGGCCACAGCAGCGTTCACATCCTTGGGCACAACATCACCACGGTACATCAGGCAGCAGGCCATGTACTTGCCGTGGCGGGG
GTCACACTTTGCCATCATAGAGGAAGGCTCAAAAGCACTGTTGCTGAGATCACTGGGGCGTAGGAGGAAAGCATGAAGTGGATCCTTGGGTAGGGCACCA
GGTTGGTCTGGAACTCATTTACATCAACATTGAGAGCACCATCAAACCTCAGGGAAGCAGTCAGTGATGAGATGACCTGCACAGTAGATTAACCTGATGA
TTAAGAGCCCAGCAAAATAT