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Detailed information on CNT30618173


BLAST search results

BLAST vs Swiss-Prot:
sp|P33623|TBA1_ANEPH, E-value = 5e-131

BLAST vs NONCODE:
NONGMAT000219, E-value = 8e-28

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692533Sesamum indicumOryza sativa34.9339.6881.59277forward
CNT30677979Sesamum indicumSetaria viridis33.5428.0384.96266forward
CNT30522101Sesamum indicumSetaria italica33.5425.0985.34266forward
CNT30533600Sesamum indicumEucalyptus grandis31.5366.8482.8250forward
CNT30547493Sesamum indicumIpomoea triloba35.3125.0486.79280forward
CNT30371538Sesamum indicumArabidopsis thaliana34.9358.3285.2277forward
CNT30501067Sesamum indicumCoffea canephora28.7531.5487.72228forward
CNT30727924Sesamum indicumCorchorus capsularis35.8129.7187.32284forward
CNT3071007Sesamum indicumQuercus suber32.5350.4983.33258forward
CNT30379324Sesamum indicumManihot esculenta35.5629.1987.59282forward
CNT30403515Sesamum indicumBeta vulgaris12.9940.0883.5103forward
CNT30504799Sesamum indicumNicotiana attenuata49.0599.4984.58389forward
CNT30712730Sesamum indicumGlycine max35.6955.2786.57283forward
CNT3098615Sesamum indicumSolanum tuberosum25.639.5785.71203forward
CNT30177039Sesamum indicumSecale cereale29.7617.3886.44236forward
CNT30284381Sesamum indicumTriticum aestivum53.0955.187.17421forward
CNT30224141Sesamum indicumHordeum vulgare22.5726.3286.03179forward
CNT30382785Sesamum indicumTriticum turgidum50.9553.0987.38404forward
CNT3085161Sesamum indicumVigna radiata28.6332.3885.46227forward
CNT30555352Sesamum indicumOryza glaberrima53.4746.982.08424forward
CNT30144688Sesamum indicumMedicago truncatula17.438.8786.23138forward
CNT30439881Sesamum indicumAegilops tauschii33.4234.5586.04265forward
CNT30249355Sesamum indicumAvena sativa33.835.6486.94268forward
CNT30655738Sesamum indicumTriticum dicoccoides37.744.4387.96299forward
CNT3075301Sesamum indicumBrassica juncea20.0529.9486.16159forward
CNT30265526Sesamum indicumBrassica rapa35.5628.483.33282forward
CNT30445643Sesamum indicumSaccharum spontaneum33.830.2187.69268forward
CNT30136973Sesamum indicumLolium perenne49.3193.184.65391forward
CNT30953Sesamum indicumZea mays33.4228.0187.17265forward
CNT3041219Sesamum indicumChlamydomonas reinhardtii27.3638.0782.95217forward
CNT30228891Sesamum indicumAnanas comosus18.5422.1185.03147forward
CNT30219368Sesamum indicumKalanchoe fedtschenkoi27.8737.8483.71221forward
CNT30208739Sesamum indicumHelianthus annuus26.9954.1885.98214forward
CNT30689745Sesamum indicumTriticum urartu50.9553.0284.9404forward
CNT30721351Sesamum indicumTriticum spelta18.4122.0588.36146forward
CNT30340361Sesamum indicumEragrostis tef16.5225.0583.97131forward
CNT30361562Sesamum indicumSorghum bicolor33.827.186.57268forward
CNT30597072Sesamum indicumOryza meridionalis30.933.7581.22245forward
CNT30360852Sesamum indicumLactuca sativa15.2622.0485.95121forward
CNT30371350Sesamum indicumOryza glumipatula30.0129.0282.35238forward
CNT30570163Sesamum indicumVitis vinifera34.5533.0986.5274forward
CNT30106557Sesamum indicumOryza longistaminata12.7447.286.14101forward
CNT30119652Sesamum indicumCitrus clementina21.9422.8382.76174forward
CNT30331419Sesamum indicumDioscorea rotundata7.442188.1459forward
CNT30103952Sesamum indicumOryza rufipogon53.4745.6482.31424forward
CNT30578286Sesamum indicumOryza barthii33.1727.481.37263forward
CNT30582828Sesamum indicumEchinochloa crusgalli34.5531.9385.4274forward
CNT30117950Sesamum indicumOryza nivara33.1731.7281.37263forward
CNT30593783Sesamum indicumEragrostis curvula19.4229.1783.77154forward
CNT30558847Sesamum indicumPanicum hallii28.8831.0383.84229forward
CNT30333509Sesamum indicumCynara cardunculus15.0121.6484.87119forward
CNT30726259Sesamum indicumLupinus angustifolius35.8134.2685.56284forward

Expression of CNT30618173

Peptides detected in this lncRNA

>peptide 1 (29 aa)
SATLVELEIMQTALCTLARSPPGTTVGGW*

>peptide 2 (58 aa)
MVATAAFTSLGTTSPLYIRQQAMYLPWRGSHFTIMDDGSKAVLAFSAEITGAYEESMK*

>peptide 3 (31 aa)
MGPSWSGTHSHQHSKLHQTAEKQSEKRSPAH*

>peptide 4 (30 aa)
QQRWLSWKSCKQLSAPWPGHHQAPQLVAGS*

Sequence

>CNT30618173
CTCAGCAACGCTGGTTGAGTTGGAAATCATGCAAACAGCTCTCTGCACCTTGGCCAGGTCACCACCAGGCACCACAGTTGGTGGCTGGTAGTTGATACCA
CACTTGAATCCTGTTGGGCACCAGTCCACAAACTGAATAGTTCTCTTGGTCTTGATGGTGGCAACAGCAGCATTCACATCTTTGGGAACAACATCACCCC
TGTACATCAGACAGCAGGCCATGTATTTGCCATGGCGGGGATCACATTTCACCATCATGGATGATGGCTCAAAAGCAGTGTTGGCCTTCTCAGCAGAGAT
CACAGGGGCATATGAAGAAAGCATGAAGTGAATCCTCGGGTATGGGACCAAGTTGGTCTGGAACTCATTCACATCAACATTCAAAGCTCCATCAAACCGC
AGAGAAGCAGTCAGAGAAGAGATCACCTGCACATTAAAATAAAAAATATTTATTAATAAAAAACATTAACCAATGCATAAAAATTTCATCAAATAACACC
ATACAACTCCAAGAATCCCAGAAATTTATACCTGAGAAATCAACCTGTTCAGATTTGTATAAGTAGGCCTCTCAATATCAAGTGATTTACGGCAAATATC
ATAGATAGCTTCGTTGTCAAGAAGCACAGCAACATCAGTGTGCTCAACAACTGCAGTTGAAACCTGAGGCGAAGGGTAAATGGTAAAACCCAGCTTTGAT
TTTTTACCATAATCAACAGAAAGCCTCTCAAGCAAGAGAGATCCAAGCCCAGATCCAGTACCACCACCCACAGCATGGAAGACCAAGAATCCC