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Detailed information on CNT30593783


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692533Eragrostis curvulaOryza sativa36.1727.3692.67191forward
CNT30678752Eragrostis curvulaSetaria viridis43.3732.392.58229forward
CNT30522101Eragrostis curvulaSetaria italica36.5518.2193.26193forward
CNT30533600Eragrostis curvulaEucalyptus grandis20.8329.4189.09110forward
CNT30547493Eragrostis curvulaIpomoea triloba36.1717.0885.34191forward
CNT30371538Eragrostis curvulaArabidopsis thaliana35.2339.1680.11186forward
CNT30618173Eragrostis curvulaSesamum indicum29.1719.4283.77154forward
CNT30727924Eragrostis curvulaCorchorus capsularis35.4219.5682.35187forward
CNT3071007Eragrostis curvulaQuercus suber32.233.2781.76170forward
CNT30379210Eragrostis curvulaManihot esculenta35.0434.3283.24185forward
CNT30709049Eragrostis curvulaGlycine max35.6127.1382.45188forward
CNT30184570Eragrostis curvulaSecale cereale36.7430.689.18194forward
CNT30295408Eragrostis curvulaTriticum aestivum36.7431.2989.18194forward
CNT30224141Eragrostis curvulaHordeum vulgare36.5528.3893.26193forward
CNT30391523Eragrostis curvulaTriticum turgidum36.7426.3289.18194forward
CNT3086234Eragrostis curvulaVigna radiata35.835.6682.01189forward
CNT30555384Eragrostis curvulaOryza glaberrima42.2326.0890.13223forward
CNT30439881Eragrostis curvulaAegilops tauschii36.7425.2987.63194forward
CNT30247895Eragrostis curvulaAvena sativa46.7832.9389.47247forward
CNT30662251Eragrostis curvulaTriticum dicoccoides36.7428.6189.18194forward
CNT3075301Eragrostis curvulaBrassica juncea35.6135.481.91188forward
CNT30446538Eragrostis curvulaSaccharum spontaneum35.824.2391.53189forward
CNT30953Eragrostis curvulaZea mays36.5520.489.12193forward
CNT3041219Eragrostis curvulaChlamydomonas reinhardtii26.5224.5690.71140forward
CNT30204030Eragrostis curvulaHelianthus annuus20.4526.0282.41108forward
CNT30689745Eragrostis curvulaTriticum urartu36.5525.3386.01193forward
CNT30720142Eragrostis curvulaTriticum spelta32.3947.7784.8171forward
CNT30362155Eragrostis curvulaSorghum bicolor43.3720.9990.83229forward
CNT30597159Eragrostis curvulaOryza meridionalis41.4830.2590.41219forward
CNT30371352Eragrostis curvulaOryza glumipatula36.5521.8390.67193forward
CNT30482824Eragrostis curvulaChara braunii31.8222.0881.55168forward
CNT30570163Eragrostis curvulaVitis vinifera35.4222.5881.28187forward
CNT30104256Eragrostis curvulaOryza rufipogon42.2317.1590.13223forward
CNT30575513Eragrostis curvulaOryza barthii36.5525.8792.23193forward
CNT30582828Eragrostis curvulaEchinochloa crusgalli36.5522.4989.64193forward
CNT30117950Eragrostis curvulaOryza nivara36.5523.2890.67193forward
CNT30558847Eragrostis curvulaPanicum hallii20.2714.593.46107forward
CNT30724674Eragrostis curvulaLupinus angustifolius35.4221.6780.75187forward

Expression of CNT30593783

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MRENTSTTLVELEIMLTARCTLARSPPGTTVGAW*

Sequence

>CNT30593783
AACTGGCAACATGAGGTGTAAGCAGACAAGCCTGTAAAGTGCTGGCAACATCAGCCAGAACATAACATAGCATAGCAATCAAGAAAACTGGCAACGTTCA
AGTAGAGAAGCCTGTTAAGTGCTAGAACAGTACAATGCAAGCGAGACACTTCTTTCTACGACGACATTCGACGGGGTAGAAGCAAACACCAACGCAACAA
CCCAAGACACAAACGAGGTCTTTTTAACACACATCATAGAGTGACCAGCAAACAGATCAGTAGTCTTCGTCCTCGTCACCCTCATCGCCGCCACCCTCCG
CGCCAACCTCCTCGTAGTCCTTCTCCAAGGCAGCCAGGTCGAACTTGTGGTCGATGCGGGAGAACACCTCGACGACGCTGGTGGAGTTGGAGATCATGCT
CACAGCACGCTGCACATTGGCGAGGTCGCCGCCGGGCACCACGGTGGGAGCCTGGTAGTTGATGCCGCACTTGAACCCCGTGGGGCACCAGTCCACGAAC
TGGATCGTGCGCTTGGTCTTGATGGTGG