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Detailed information on CNT30662251


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRR5|TBA3_HORVU, E-value = 6e-122

BLAST vs NONCODE:
NONGMAT000219, E-value = 4e-63

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692533Triticum dicoccoidesOryza sativa46.3144.9991.72314forward
CNT30677979Triticum dicoccoidesSetaria viridis65.784791.48446forward
CNT30533600Triticum dicoccoidesEucalyptus grandis48.6788.2489.39330forward
CNT30184570Triticum dicoccoidesSecale cereale68.4473.1998.28464forward
CNT30294619Triticum dicoccoidesTriticum aestivum71.0957.2499.79482forward
CNT30391405Triticum dicoccoidesTriticum turgidum81.2772.699.64551forward
CNT30555384Triticum dicoccoidesOryza glaberrima72.4257.4390.84491forward
CNT30439881Triticum dicoccoidesAegilops tauschii75.2266.4997.25510forward
CNT30247895Triticum dicoccoidesAvena sativa63.5757.4791.65431forward
CNT3041219Triticum dicoccoidesChlamydomonas reinhardtii32.338.4289.04219forward
CNT30684179Triticum dicoccoidesTriticum urartu39.3842.5899.63267forward
CNT30721351Triticum dicoccoidesTriticum spelta37.0237.9299.6251forward
CNT30340361Triticum dicoccoidesEragrostis tef26.1133.8492.09177forward
CNT30362155Triticum dicoccoidesSorghum bicolor60.7737.7690.05412forward
CNT30597072Triticum dicoccoidesOryza meridionalis50.5947.2590.67343forward
CNT30360524Triticum dicoccoidesLactuca sativa29.9431.6783.25203forward
CNT30371316Triticum dicoccoidesOryza glumipatula70.540.5191478forward
CNT30106557Triticum dicoccoidesOryza longistaminata29.3592.9992.46199forward
CNT30148523Triticum dicoccoidesBrachypodium distachyon35.6937.5288.43242forward
CNT30104125Triticum dicoccoidesOryza rufipogon76.1139.0690.7516forward
CNT30575848Triticum dicoccoidesOryza barthii50.8838.3891.01345forward
CNT30117950Triticum dicoccoidesOryza nivara73.4560.0790.96498forward
CNT30593783Triticum dicoccoidesEragrostis curvula28.6136.7489.18194forward
CNT30558847Triticum dicoccoidesPanicum hallii59.7354.8891.6405forward

Expression of CNT30662251

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MREKTSTTLVELEIMHTALWTLARSPPGTTLGGW*

>peptide 2 (42 aa)
ANEITCILTKVRSRFKHTTGSYNTTGCKPNTTQQTFKQTDNR*

>peptide 3 (59 aa)
MVRFVLMVATAALTSLGTTSPRYMRQQAMYLPWRGSHLAIMEEGSKALLVISATESCSW*

Sequence

>CNT30662251
AGGCAAACGAGATAACATGCATATTGACCAAGGTGCGAAGCAGGTTCAAACATACCACAGGTTCATACAACACAACAGGTTGTAAACCAAACACCACACA
GCAAACATTCAAACAGACAGACAACAGATAAAGCCGCTTGGGCAGATCACAGGATAGTAGTAGACGAAGGCACGCTTGACGTACATCAGGTCGAACTTGT
GGTCGATGCGGGAGAAGACCTCGACAACGCTGGTGGAGTTGGAGATCATGCACACGGCCCTCTGGACCTTGGCGAGGTCGCCGCCTGGGACGACGCTGGG
TGGCTGGTAGTTGATACCACACTTGAAACCAGTGGGGCACCAGTCCACAAACTGGATGGTGCGCTTCGTCTTGATGGTGGCCACAGCAGCGTTGACATCC
TTGGGCACAACATCACCACGGTACATGAGGCAGCAGGCCATGTACTTGCCGTGGCGGGGGTCACACTTGGCCATCATGGAGGAAGGCTCGAAGGCGCTGT
TGGTGATCTCAGCGACAGAGAGCTGCTCATGGTAAGCCTTCTCAGCTGAGATCACTGGGGCGTAGGAGGAAAGCATGAAGTGGATCCTCGGGTAGGGCAC
CAGGTTGGTCTGAAACTCGTTCACATCAACATTCAGAGCACCATCAAACCTCAGGGAAGCAGTCAGGGATGAGATGAC