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Detailed information on CNT30148523


BLAST search results

BLAST vs Swiss-Prot:
sp|P33624|TBA2_ANEPH, E-value = 5e-98

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692533Brachypodium distachyonOryza sativa21.8620.294.33141forward
CNT30677979Brachypodium distachyonSetaria viridis35.9724.4588.36232forward
CNT30533600Brachypodium distachyonEucalyptus grandis33.858.2988.53218forward
CNT30547605Brachypodium distachyonIpomoea triloba35.9742.2684.91232forward
CNT30371538Brachypodium distachyonArabidopsis thaliana19.6926.7483.46127forward
CNT30729860Brachypodium distachyonCorchorus capsularis37.5226.1683.47242forward
CNT3071007Brachypodium distachyonQuercus suber35.0444.2384.51226forward
CNT30379228Brachypodium distachyonManihot esculenta37.2127.5280.83240forward
CNT30507454Brachypodium distachyonNicotiana attenuata34.5734.3682.96223forward
CNT30712730Brachypodium distachyonGlycine max26.8233.7984.97173forward
CNT3098615Brachypodium distachyonSolanum tuberosum27.7534.8985.47179forward
CNT30184570Brachypodium distachyonSecale cereale37.5238.1788.43242forward
CNT30294619Brachypodium distachyonTriticum aestivum37.5228.7488.02242forward
CNT30223592Brachypodium distachyonHordeum vulgare16.7427.6993.52108forward
CNT30394677Brachypodium distachyonTriticum turgidum31.1670.0393.03201forward
CNT3085161Brachypodium distachyonVigna radiata34.8832.181.33225forward
CNT30555281Brachypodium distachyonOryza glaberrima37.5229.2390.91242forward
CNT30144688Brachypodium distachyonMedicago truncatula24.544.5182.91158forward
CNT30439881Brachypodium distachyonAegilops tauschii37.5231.5589.26242forward
CNT30247895Brachypodium distachyonAvena sativa37.5232.2792.56242forward
CNT30662251Brachypodium distachyonTriticum dicoccoides37.5235.6988.43242forward
CNT3075301Brachypodium distachyonBrassica juncea38.2946.5283247forward
CNT30445643Brachypodium distachyonSaccharum spontaneum37.5227.2890.91242forward
CNT30136973Brachypodium distachyonLolium perenne21.7133.3388.57140forward
CNT30953Brachypodium distachyonZea mays35.9724.5289.66232forward
CNT3041219Brachypodium distachyonChlamydomonas reinhardtii33.0237.3786.85213forward
CNT30229012Brachypodium distachyonAnanas comosus26.220.3985.8169forward
CNT30217674Brachypodium distachyonKalanchoe fedtschenkoi18.2933.0586.44118forward
CNT30655223Brachypodium distachyonRosa chinensis27.9170.8781.67180forward
CNT30208739Brachypodium distachyonHelianthus annuus22.0235.9583.8142forward
CNT30684179Brachypodium distachyonTriticum urartu28.8429.6789.25186forward
CNT30721351Brachypodium distachyonTriticum spelta27.4426.7488.7177forward
CNT30340361Brachypodium distachyonEragrostis tef17.9822.1890.52116forward
CNT30362155Brachypodium distachyonSorghum bicolor35.8121.1789.18231forward
CNT30597072Brachypodium distachyonOryza meridionalis34.4230.5891.89222forward
CNT30360524Brachypodium distachyonLactuca sativa39.6939.9483.98256forward
CNT30371316Brachypodium distachyonOryza glumipatula37.5220.5190.91242forward
CNT30570163Brachypodium distachyonVitis vinifera37.2128.9980.83240forward
CNT3052700Brachypodium distachyonAmborella trichopoda20.7842.4184.33134forward
CNT30106557Brachypodium distachyonOryza longistaminata20.3161.2190.84131forward
CNT30119652Brachypodium distachyonCitrus clementina27.623.3681.46178forward
CNT30575645Brachypodium distachyonOryza barthii35.9727.3693.53232forward
CNT30582828Brachypodium distachyonEchinochloa crusgalli37.3628.0988.8241forward
CNT30117950Brachypodium distachyonOryza nivara37.5229.1990.91242forward
CNT30174517Brachypodium distachyonVigna angularis20.3165.1787.02131forward
CNT30558847Brachypodium distachyonPanicum hallii37.5232.7989.67242forward
CNT30724701Brachypodium distachyonLupinus angustifolius37.2121.2681.25240forward
CNT3065151Brachypodium distachyonSelaginella moellendorffii14.2644.6686.9692forward
CNT3040082Brachypodium distachyonMarchantia polymorpha38.9159.7680.48251forward

Expression of CNT30148523

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MCYLGHEAVEVGVGGPLDVQGAPADVVDGLIVEQDGDVGVLQERVRGQHAVVGLDHRGRHLRRWVHGEAELGLLSVVHGQALEEERAQTRPSSA

>peptide 2 (62 aa)
MKWILGYGTREVVSDEITCTTKRNKIQNSFQFDITDCIALVHGKQSDVGQCVTWDTRRLRLV*

>peptide 3 (84 aa)
LGLDGGHGRVHVLGHHVAPVHEAAGHVLAVARVTLGHHGRWLEGAVGDLGHGELLVVGLLGGDDRSVGREHEVDPWVRDQGSGQ*

>peptide 4 (56 aa)
LVLMVATAAFTSLGTTSPRYMRQQAMYLPWRGSHLAIMDDGSKALLVISDTESCSW*

Sequence

>CNT30148523
GCTTGGTCTTGATGGTGGCCACGGCCGCGTTCACGTCCTTGGGCACCACGTCGCCCCGGTACATGAGGCAGCAGGCCATGTACTTGCCGTGGCGAGGGTC
ACACTTGGCCATCATGGACGATGGCTCGAAGGCGCTGTTGGTGATCTCGGACACGGAGAGCTGCTCGTGGTAGGCCTTCTCGGCGGAGATGACAGGAGCG
TAGGACGAGAGCATGAAGTGGATCCTTGGGTACGGGACCAGGGAAGTGGTCAGTGATGAGATCACCTGCACAACCAAACGAAACAAGATTCAGAACAGTT
TTCAGTTTGACATCACAGATTGCATAGCACTAGTACATGGGAAACAATCAGATGTTGGGCAATGTGTTACCTGGGACACGAGGCGGTTGAGGTTGGTGTA
GGTGGGCCTCTCGATGTCCAGGGAGCGCCTGCAGATGTCGTAGATGGCCTCATTGTCGAGCAGGATGGAGACGTCGGTGTGCTCCAGGAGCGAGTGCGTG
GACAACACGCTGTTGTAGGGCTCGACCACAGAGGTCGACACCTGAGGAGATGGGTACACGGTGAAGCCGAGCTTGGACTTCTTTCCGTAGTCCACGGACA
GGCGCTCGAGGAGGAGCGAGCCCAGACCAGACCCAGTTCCGCCAC