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Detailed information on CNT30219368


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0WV25|TBA4_ARATH, E-value = 2e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692533Kalanchoe fedtschenkoiOryza sativa39.3832.9583.91230forward
CNT30677979Kalanchoe fedtschenkoiSetaria viridis39.3824.2483.48230forward
CNT30640127Kalanchoe fedtschenkoiNymphaea colorata20.2114.7988.14118forward
CNT30533600Kalanchoe fedtschenkoiEucalyptus grandis36.8257.4987.91215forward
CNT30547493Kalanchoe fedtschenkoiIpomoea triloba39.0420.3986.4228forward
CNT30517711Kalanchoe fedtschenkoiJuglans regia25.1727.7486.39147forward
CNT30702815Kalanchoe fedtschenkoiQuercus lobata15.4124.4688.8990forward
CNT30371538Kalanchoe fedtschenkoiArabidopsis thaliana39.2148.2184.72229forward
CNT30501067Kalanchoe fedtschenkoiCoffea canephora31.1625.1785.71182forward
CNT30618173Kalanchoe fedtschenkoiSesamum indicum37.8427.8783.71221forward
CNT30729860Kalanchoe fedtschenkoiCorchorus capsularis38.3624.2287.5224forward
CNT3071007Kalanchoe fedtschenkoiQuercus suber38.3643.8482.59224forward
CNT30379210Kalanchoe fedtschenkoiManihot esculenta39.3842.6786.96230forward
CNT30504799Kalanchoe fedtschenkoiNicotiana attenuata36.1353.9685.31211forward
CNT30709081Kalanchoe fedtschenkoiGlycine max39.3830.5985.22230forward
CNT3098615Kalanchoe fedtschenkoiSolanum tuberosum29.1133.1485.29170forward
CNT30177039Kalanchoe fedtschenkoiSecale cereale39.3816.9486.09230forward
CNT30283587Kalanchoe fedtschenkoiTriticum aestivum39.3832.1286.96230forward
CNT30224141Kalanchoe fedtschenkoiHordeum vulgare31.5127.0684.24184forward
CNT30382785Kalanchoe fedtschenkoiTriticum turgidum39.3830.2286.52230forward
CNT3086234Kalanchoe fedtschenkoiVigna radiata28.631.5187.43167forward
CNT30555281Kalanchoe fedtschenkoiOryza glaberrima39.3827.7884.78230forward
CNT30439881Kalanchoe fedtschenkoiAegilops tauschii39.3829.9986.52230forward
CNT30247087Kalanchoe fedtschenkoiAvena sativa39.3831.4287.39230forward
CNT30655883Kalanchoe fedtschenkoiTriticum dicoccoides39.3832.2187.39230forward
CNT3059767Kalanchoe fedtschenkoiArabidopsis lyrata24.3220.0383.1142forward
CNT3075301Kalanchoe fedtschenkoiBrassica juncea22.9525.2487.31134forward
CNT30265526Kalanchoe fedtschenkoiBrassica rapa39.3823.1685.65230forward
CNT30445643Kalanchoe fedtschenkoiSaccharum spontaneum39.3825.9385.22230forward
CNT30136973Kalanchoe fedtschenkoiLolium perenne35.7949.7688.04209forward
CNT3041219Kalanchoe fedtschenkoiChlamydomonas reinhardtii34.7635.6184.73203forward
CNT30689745Kalanchoe fedtschenkoiTriticum urartu39.3830.1886.52230forward
CNT30361562Kalanchoe fedtschenkoiSorghum bicolor39.3823.2683.04230forward
CNT30597072Kalanchoe fedtschenkoiOryza meridionalis39.3831.6884.35230forward
CNT30371316Kalanchoe fedtschenkoiOryza glumipatula39.3819.4984.78230forward
CNT30481833Kalanchoe fedtschenkoiChara braunii21.5842.7181.75126forward
CNT30430260Kalanchoe fedtschenkoiPapaver somniferum21.9221.9985.94128forward
CNT30570163Kalanchoe fedtschenkoiVitis vinifera39.3827.7885.22230forward
CNT3022486Kalanchoe fedtschenkoiPopulus trichocarpa23.6322.1285.51138forward
CNT30104256Kalanchoe fedtschenkoiOryza rufipogon39.3817.6984.78230forward
CNT30575848Kalanchoe fedtschenkoiOryza barthii39.3825.5884.78230forward
CNT30582828Kalanchoe fedtschenkoiEchinochloa crusgalli23.1215.7388.15135forward
CNT30117950Kalanchoe fedtschenkoiOryza nivara39.3827.7484.78230forward
CNT30558847Kalanchoe fedtschenkoiPanicum hallii29.6223.4487.28173forward
CNT30333509Kalanchoe fedtschenkoiCynara cardunculus22.0923.4583.72129forward
CNT30726291Kalanchoe fedtschenkoiLupinus angustifolius39.7329.5984.91232forward

Expression of CNT30219368

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVRLVLIMPTAAFTSLGTTSPRYIRQQAMYFPWRGSHL

>peptide 2 (45 aa)
FFFIIIAFPISYELRTQNKFDKGQHKIQQAESKYIGGQASRISKQ*

Sequence

>CNT30219368
TTTTTTTTCATAATAATAGCATTTCCCATTTCATATGAGTTGAGAACCCAAAACAAATTCGATAAAGGACAACATAAAATCCAACAAGCAGAGAGCAAAT
ATATAGGAGGTCAAGCCAGCAGAATCTCAAAACAATAAGGACACGGCAAATGGAGTTTACTTAAGGACATACGCTCCTGACTAGTACTCCTCATTGTCAT
CATCGTTCCCTTCAGCTGATTCAGCACCAACCTCTTCATAGTCCTTCTCCAGAGCAGCAAGGTCCTCCCTGGCTTCAGAAAACTCTCCCTCTTCCATCCC
CTCACCCACGTACCAGTGGACAAAGGCACGCTTGGAATACATGAGATCAAACTTGAGATCATGCAGACTGCCCTCTGCACCTTGGCAAGGTCTCCACCTG
GGACAACTGTTGGTGGCTGATAGTTGATACCGCATTTGAATCCAGTGGGGCACCAGTCAACAAATTGGATGGTGCGCTTGGTTTTGATAATGCCCACAGC
TGCGTTCACGTCTTTGGGCACAACGTCACCGCGGTACATCAGGCAGCAGGCCATGTATTTTCCATGGCGAGGGTCACACTTGGC