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Detailed information on CNT30724701


BLAST search results

BLAST vs Swiss-Prot:
sp|P33629|TBA_PRUDU, E-value = 3e-141

BLAST vs NONCODE:
NONGMAT000219, E-value = 4e-83

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692533Lupinus angustifoliusOryza sativa27.2844.1381.49308forward
CNT30677979Lupinus angustifoliusSetaria viridis40.1247.7384.11453forward
CNT30640127Lupinus angustifoliusNymphaea colorata24.2734.3489.05274forward
CNT30547493Lupinus angustifoliusIpomoea triloba45.746.1586.05516forward
CNT30702815Lupinus angustifoliusQuercus lobata14.2643.7590.06161forward
CNT30371538Lupinus angustifoliusArabidopsis thaliana36.5886.9589.1413forward
CNT3071007Lupinus angustifoliusQuercus suber33.1373.1984.49374forward
CNT30379228Lupinus angustifoliusManihot esculenta53.5969.3889.26605forward
CNT30177039Lupinus angustifoliusSecale cereale52.8843.9685.09597forward
CNT30284381Lupinus angustifoliusTriticum aestivum38.8857.4687.7439forward
CNT30224141Lupinus angustifoliusHordeum vulgare28.3447.0682.19320forward
CNT30391523Lupinus angustifoliusTriticum turgidum36.7656.3185.78415forward
CNT3085161Lupinus angustifoliusVigna radiata27.8144.7985.99314forward
CNT30237104Lupinus angustifoliusBrassica oleracea9.2132.190.38104forward
CNT30555417Lupinus angustifoliusOryza glaberrima39.7755.6481.51449forward
CNT30439881Lupinus angustifoliusAegilops tauschii43.2263.6285.25488forward
CNT3059767Lupinus angustifoliusArabidopsis lyrata21.0833.5788.66238forward
CNT30265526Lupinus angustifoliusBrassica rapa39.2444.6187.81443forward
CNT30611949Lupinus angustifoliusArabis alpina10.5434.3989.08119forward
CNT30445850Lupinus angustifoliusSaccharum spontaneum52.3564.9584.77591forward
CNT3041219Lupinus angustifoliusChlamydomonas reinhardtii18.7837.1982.08212forward
CNT30204030Lupinus angustifoliusHelianthus annuus17.9848.9290.15203forward
CNT30624589Lupinus angustifoliusDaucus carota11.3425.8189.06128forward
CNT30689745Lupinus angustifoliusTriticum urartu38.8857.6187.93439forward
CNT30371316Lupinus angustifoliusOryza glumipatula39.7738.0581.51449forward
CNT30482824Lupinus angustifoliusChara braunii25.8638.3782.88292forward
CNT30430260Lupinus angustifoliusPapaver somniferum20.113990.31227forward
CNT30570163Lupinus angustifoliusVitis vinifera41.815787.71472forward
CNT3052700Lupinus angustifoliusAmborella trichopoda13.247.1587.92149forward
CNT3024728Lupinus angustifoliusPopulus trichocarpa25.4235.3488.5287forward
CNT30148523Lupinus angustifoliusBrachypodium distachyon21.2637.2181.25240forward
CNT30104125Lupinus angustifoliusOryza rufipogon47.7440.881.08539forward
CNT30578324Lupinus angustifoliusOryza barthii30.7435.3481.27347forward
CNT30582828Lupinus angustifoliusEchinochloa crusgalli52.446985.14592forward
CNT30117950Lupinus angustifoliusOryza nivara42.6958.1481.54482forward
CNT30558847Lupinus angustifoliusPanicum hallii31.5348.2484.83356forward
CNT30333509Lupinus angustifoliusCynara cardunculus12.9326.5584.93146forward

Expression of CNT30724701

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MDVFINISEKSGASKQCHPKQQQPTNTVLVESEETNTT*

>peptide 2 (40 aa)
MRSNLWSMRENTSATLVELEIMQTALCTLARSPPGTTVGG*

>peptide 3 (50 aa)
MEFNIQKYCIKHTGRSNKDNIWMFSSTFQKKAGHQNNAIQSNNNPQIQFW*

>peptide 4 (79 aa)
MVRFVLMVPTAALTSLGTTSPRYIRQQAMYFPWRGSHLAIIDEGSNALLVISATESCSWYAFSAEITGAYEESMKWILG*

>peptide 5 (34 aa)
YLLSNKSLFKSNDISQDYSSPEKKRWSSTYKNTA*

Sequence

>CNT30724701
TATTTATTAAGTAACAAATCTTTATTCAAATCCAATGATATAAGCCAAGATTACTCTTCCCCCGAAAAAAAAAGATGGAGTTCAACATACAAAAATACTG
CATAAAACACACTGGCAGAAGCAATAAAGATAATATATGGATGTTTTCATCAACATTTCAGAAAAAAGCGGGGCATCAAAACAATGCCATCCAAAGCAAC
AACAACCCACAAATACAGTTCTGGTAGAATCTGAAGAAACAAACACAACATAGAAAGGTCATACAAGAAAAACAAAAGGCCACCAGAATCAGAAATAGAT
TCTATCTAGTAGTCTTCAATGTCATCATCACCACCCTCAGCAGACTCAGCACCCACTTCTTCATAATCCTTCTCAAGGGCAGCAAGATCTTCACGAGCCT
CAGAGAATTCACCTTCTTCCATACCCTCACCCACATACCAGTGAACAAAAGCACGCTTGGCATACATGAGATCAAACTTGTGGTCAATGCGAGAGAACAC
CTCGGCCACACTGGTCGAGTTAGAAATCATGCAAACAGCCCTCTGCACCTTGGCAAGGTCACCTCCGGGAACAACAGTAGGTGGCTGATAGTTAATACCA
CACTTGAAACCGGTAGGGCACCAATCAACAAACTGAATGGTTCGCTTTGTCTTGATGGTGCCAACAGCAGCATTGACATCCTTGGGGACAACATCACCAC
GGTACATCAGACAACAAGCCATGTACTTTCCGTGGCGTGGGTCACACTTGGCCATCATAGATGAGGGCTCAAATGCACTGTTAGTGATTTCGGCCACGGA
AAGTTGTTCATGGTATGCCTTCTCAGCAGAGATAACAGGTGCATATGAGGAAAGCATGAAGTGGATTCTAGGATAGGGGACCAAGTTGGTCTGGAATTCA
GTCACATCCACATTGAGGGCACCATCAAACCTCAGAGAAGGGTAAACAGTGAACCCGAGCTTTGATTTCTTTCCATAGTCAACGGACAAACGTTCCAACA
GAAGGGAACCGAGACCAGAACCAGTTCCTCCACCAACAGCATTGAACACCAAGAAACCTTGGAGGCCAGTGCAGTTATCAGCAAGCTTCCTGATACGGTC
CAAGCACAGATCAACGATCTCTTTCCCAA