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Detailed information on CNT30712730

BLAST search results

BLAST vs Swiss-Prot:
sp|P33629|TBA_PRUDU, E-value = 1e-118

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30692533	Glycine max	Oryza sativa	53.52	39.26	84.31	274	forward
CNT30677760	Glycine max	Setaria viridis	71.88	40.57	84.78	368	forward
CNT30522101	Glycine max	Setaria italica	78.12	37.74	84.5	400	forward
CNT30533600	Glycine max	Eucalyptus grandis	54.69	74.87	85.71	280	forward
CNT30702815	Glycine max	Quercus lobata	26.17	36.41	91.04	134	forward
CNT30371538	Glycine max	Arabidopsis thaliana	70.7	76.21	87.57	362	forward
CNT30618173	Glycine max	Sesamum indicum	55.27	35.69	86.57	283	forward
CNT30727924	Glycine max	Corchorus capsularis	72.07	38.6	86.99	369	forward
CNT30379228	Glycine max	Manihot esculenta	77.73	45.64	87.19	398	forward
CNT30504799	Glycine max	Nicotiana attenuata	48.05	62.92	86.99	246	forward
CNT3098615	Glycine max	Solanum tuberosum	51.37	51.27	85.17	263	forward
CNT30184570	Glycine max	Secale cereale	59.57	48.11	86.89	305	forward
CNT30283587	Glycine max	Triticum aestivum	100.39	71.79	83.46	514	forward
CNT30391523	Glycine max	Triticum turgidum	68.95	47.9	85.84	353	forward
CNT3085161	Glycine max	Vigna radiata	46.09	33.67	87.29	236	forward
CNT30555281	Glycine max	Oryza glaberrima	59.96	37.08	82.74	307	forward
CNT30439881	Glycine max	Aegilops tauschii	70.9	47.33	84.85	363	forward
CNT30249355	Glycine max	Avena sativa	71.88	48.94	85.05	368	forward
CNT30265526	Glycine max	Brassica rapa	71.29	36.76	85.48	365	forward
CNT30445850	Glycine max	Saccharum spontaneum	78.12	43.96	84.5	400	forward
CNT30136973	Glycine max	Lolium perenne	72.85	88.81	83.91	373	forward
CNT30953	Glycine max	Zea mays	78.12	42.28	83.75	400	forward
CNT3041219	Glycine max	Chlamydomonas reinhardtii	40.82	36.67	82.3	209	forward
CNT30228891	Glycine max	Ananas comosus	22.27	17.14	90.35	114	forward
CNT30208739	Glycine max	Helianthus annuus	40.23	52.15	89.81	206	forward
CNT30689745	Glycine max	Triticum urartu	99.8	67.06	83.37	511	forward
CNT30721298	Glycine max	Triticum spelta	24.02	37.85	91.87	123	forward
CNT30361562	Glycine max	Sorghum bicolor	78.12	40.44	83.5	400	forward
CNT30597072	Glycine max	Oryza meridionalis	57.03	40.22	82.88	292	forward
CNT30119652	Glycine max	Citrus clementina	42.58	28.61	81.19	218	forward
CNT30148523	Glycine max	Brachypodium distachyon	33.79	26.82	84.97	173	forward
CNT30575848	Glycine max	Oryza barthii	65.43	37.26	82.39	335	forward
CNT30582828	Glycine max	Echinochloa crusgalli	71.88	42.89	84.51	368	forward
CNT30117950	Glycine max	Oryza nivara	59.96	37.03	82.74	307	forward
CNT30726259	Glycine max	Lupinus angustifolius	77.93	48.13	90.73	399	forward

Expression of CNT30712730

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MVLLVLMVATAAFTSLGTTSPRYIRQHAMYFP*

>peptide 2 (28 aa)
MGPSWSGIQSHPHSGHHQTSRKQSKMKSP

>peptide 3 (35 aa)
FHTLTHVPVDKSTLGIHEIKLVINAAKHFSHTGGV*

>peptide 4 (36 aa)
MVGKHEMDSRVWDQVGLEFSHIHIQGTIKPQGSSQR*

>peptide 5 (34 aa)
MRPNTSATLVEFEIMQTALCTLARSPPGTTVGGW*

>peptide 6 (34 aa)
MKWILGYGTKLVWNSVTSTFRAPSNLKEAVKDEIT

Sequence

>CNT30712730
TTCCATACCCTCACCCACGTACCAGTGGACAAAAGCACGCTTGGCATACATGAGATCAAACTTGTGATCAATGCGGCCAAACACTTCAGCCACACTGGTG
GAGTTTGAAATCATGCAAACTGCCCTCTGCACCTTGGCAAGGTCGCCTCCAGGAACAACGGTAGGTGGCTGGTAGTTAATACCACACTTGAAACCAGTAG
GGCACCAATCCACAAACTGAATGGTCCTCTTGGTCTTGATGGTGGCAACAGCAGCGTTTACATCTTTGGGCACAACATCACCACGGTACATCAGGCAACA
CGCCATGTACTTTCCGTGACGAGGATCACACTTGGCCATCATGGACGATGGCTCAAAAGCACTGTTGGTAATTTCTGCCACTGAGAGCTGTTCATGGTAG
GAAAGCATGAAATGGATTCTAGGGTATGGGACCAAGTTGGTCTGGAATTCAGTCACATCCACATTCAGGGCACCATCAAACCTCAAGGAAGCAGTCAAAG
ATGAAATCACCT