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Detailed information on CNT30640127


BLAST search results

BLAST vs Swiss-Prot:
sp|P33629|TBA_PRUDU, E-value = 7e-168

BLAST vs NONCODE:
NONGMAT000220, E-value = 2e-71

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694759Nymphaea colorataOryza sativa37.4760.1681.61299forward
CNT30678108Nymphaea colorataSetaria viridis39.7234.9185.17317forward
CNT30521842Nymphaea colorataSetaria italica39.7234.3485.17317forward
CNT30532757Nymphaea colorataEucalyptus grandis12.7823.1890.2102forward
CNT30547493Nymphaea colorataIpomoea triloba33.9624.2485.61271forward
CNT30517711Nymphaea colorataJuglans regia24.3136.687.11194forward
CNT30702815Nymphaea colorataQuercus lobata20.5544.5785.98164forward
CNT30371538Nymphaea colorataArabidopsis thaliana33.7156.6388.1269forward
CNT30501067Nymphaea colorataCoffea canephora40.144.2684.38320forward
CNT30618214Nymphaea colorataSesamum indicum14.6635.5688.89117forward
CNT30727923Nymphaea colorataCorchorus capsularis34.3423.1489.78274forward
CNT3071006Nymphaea colorataQuercus suber38.3563.3584.97306forward
CNT30379228Nymphaea colorataManihot esculenta32.8330.0589.69262forward
CNT30403515Nymphaea colorataBeta vulgaris25.4478.9983.74203forward
CNT30504800Nymphaea colorataNicotiana attenuata26.1947.2986.6209forward
CNT30709081Nymphaea colorataGlycine max39.7242.1586.75317forward
CNT30177336Nymphaea colorataSecale cereale39.7227.6686.12317forward
CNT30284381Nymphaea colorataTriticum aestivum34.2135.7387.91273forward
CNT30224654Nymphaea colorataHordeum vulgare34.4618.0183.27275forward
CNT30391523Nymphaea colorataTriticum turgidum34.4637.3185.45275forward
CNT3086234Nymphaea colorataVigna radiata31.8347.9287.4254forward
CNT30555279Nymphaea colorataOryza glaberrima31.0879.4983.06248forward
CNT30144939Nymphaea colorataMedicago truncatula24.9440.8688.94199forward
CNT30439881Nymphaea colorataAegilops tauschii24.1925.1686.53193forward
CNT30247087Nymphaea colorataAvena sativa34.2137.387.91273forward
CNT30655883Nymphaea colorataTriticum dicoccoides34.2138.2487.55273forward
CNT3059767Nymphaea colorataArabidopsis lyrata27.1930.6187.56217forward
CNT3075301Nymphaea colorataBrassica juncea36.4754.881.79291forward
CNT30265526Nymphaea colorataBrassica rapa34.3427.5986.13274forward
CNT30445850Nymphaea colorataSaccharum spontaneum34.4630.2285.09275forward
CNT30136247Nymphaea colorataLolium perenne20.4353.2786.5163forward
CNT3010240Nymphaea colorataZea mays64.9155.2281.85518forward
CNT3041219Nymphaea colorataChlamydomonas reinhardtii41.2357.7281.46329forward
CNT30606894Nymphaea colorataGossypium raimondii41.3590.4183.94330forward
CNT30229012Nymphaea colorataAnanas comosus27.9426.988.34223forward
CNT30219368Nymphaea colorataKalanchoe fedtschenkoi14.7920.2188.14118forward
CNT30655223Nymphaea colorataRosa chinensis21.4367.3284.21171forward
CNT30204030Nymphaea colorataHelianthus annuus25.4448.9288.67203forward
CNT30716299Nymphaea colorataMalus domestica golden40.653.3887.35324forward
CNT30689745Nymphaea colorataTriticum urartu34.2135.8387.55273forward
CNT30720142Nymphaea colorataTriticum spelta41.8593.383.83334forward
CNT30340361Nymphaea colorataEragrostis tef18.9228.8784.77151forward
CNT30362155Nymphaea colorataSorghum bicolor38.2227.9685.9305forward
CNT30619808Nymphaea colorataCajanus cajan17.5423.5384.29140forward
CNT30596030Nymphaea colorataOryza meridionalis20.367.585.19162forward
CNT30360524Nymphaea colorataLactuca sativa41.9852.2679.4335forward
CNT30371316Nymphaea colorataOryza glumipatula64.9143.981.66518forward
CNT30482824Nymphaea colorataChara braunii31.733.2580.63253forward
CNT30430260Nymphaea colorataPapaver somniferum23.9332.8289.53191forward
CNT30571197Nymphaea colorataVitis vinifera34.3469.5486.13274forward
CNT3024647Nymphaea colorataPopulus trichocarpa41.8564.4885.93334forward
CNT30331462Nymphaea colorataDioscorea rotundata21.6833.6683.24173forward
CNT30147962Nymphaea colorataBrachypodium distachyon16.7939.5389.55134forward
CNT30100887Nymphaea colorataOryza rufipogon22.5623.3885180forward
CNT30575645Nymphaea colorataOryza barthii38.8536.5686.45310forward
CNT30582828Nymphaea colorataEchinochloa crusgalli34.4632.0584.36275forward
CNT30117950Nymphaea colorataOryza nivara22.8121.9582.97182forward
CNT30558847Nymphaea colorataPanicum hallii23.6825.6184.13189forward
CNT30333509Nymphaea colorataCynara cardunculus27.3239.6482.11218forward
CNT30724701Nymphaea colorataLupinus angustifolius34.3424.2789.05274forward
CNT3040082Nymphaea colorataMarchantia polymorpha39.8575.7182.39318forward

Expression of CNT30640127

Peptides detected in this lncRNA

>peptide 1 (34 aa)
VLLQCSEILTSLRELTFFHSLTNVPVNKGTLGIH*

>peptide 2 (45 aa)
MGGKYTVVGLNNRCGNLWRRIHSKAKLGLLSIVYRKALQEKGSKA*

>peptide 3 (48 aa)
PSPVQRDPHEPQRTHLLPFPHQRTSEQRHAWHTLDQTCDQCERTPQQH*

>peptide 4 (88 aa)
MVSLLCRDHRSIRGKHEVDPGVGNQVRLEFCDINVEGTIEPQRCCQRRDDLRDKAVQIGVGGALNVKRAPADVIDGFVVEKDSHISVL*

Sequence

>CNT30640127
GTCCTTCTCCAGTGCAGCGAGATCCTCACGAGCCTCAGAGAACTCACCTTCTTCCATTCCCTCACCAACGTACCAGTGAACAAAGGCACGCTTGGCATAC
ATTAGATCAAACTTGTGATCAATGCGAGAGAACACCTCAGCAACACTAGTCGAGTTGGAGATCATGCAGACAGCCCTCTGAACCTTGGCAAGATCACCAC
CAGGAACAACTGTTGGTGGCTGGTAGTTAATACCACACTTGAACCCTGTGGGGCACCAGTCGACAAACTGGATGGCACTATTGGTAATCTCAGCCACAGA
CAGCTGCTCATGGTAAGCCTTCTCTGCAGAGATCACAGGAGCATAAGAGGAAAGCATGAAGTGGATCCTGGGGTAGGGAACCAAGTTCGTTTGGAATTCT
GTGACATCAACGTTGAGGGCACCATCGAACCGCAGAGATGCTGTCAACGAAGAGATGACCTGAGAGACAAGGCGGTTCAGATTGGTGTAGGTGGGGCGCT
CAATGTCAAGAGAGCGCCTGCAGATGTCATAGATGGCTTCGTTGTCGAGAAGGACAGCCACATCAGTGTGCTCTAGGAGAGAATGGGTGGAAAGTACACT
GTTGTAGGGCTCAACAACAGATGTGGAAACCTGTGGAGAAGGATACACAGTAAAGCCAAGCTTGGACTTCTTTCCATAGTCTACAGAAAGGCGCTCCAAG
AGAAGGGATCCAAGGCCTGAGCCGGTGCCACCACCAACAGCATTGAAAACTAAGAAACCTTGGAGACCAGTGCAGTTGTCAGCGAGCTTTCTGATGCG