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Detailed information on CNT30514313


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Juglans regiaOryza sativa20.8619.5592.3178forward
CNT30675831Juglans regiaSetaria viridis21.3914.7393.7580forward
CNT30523531Juglans regiaSetaria italica21.3911.6693.7580forward
CNT30318276Juglans regiaCorylus avellana22.468.1596.4384forward
CNT30547713Juglans regiaIpomoea triloba22.469.7997.6284forward
CNT30701463Juglans regiaQuercus lobata22.4616.2897.6284forward
CNT30376000Juglans regiaArabidopsis thaliana21.9321.9395.1282forward
CNT30500546Juglans regiaCoffea canephora21.3917.289580forward
CNT30278460Juglans regiaChenopodium quinoa22.7313.6796.4785forward
CNT3070099Juglans regiaQuercus suber22.4615.0897.6284forward
CNT30404042Juglans regiaBeta vulgaris22.4617.597.6284forward
CNT30526086Juglans regiaPhaseolus vulgaris22.1915.5497.5983forward
CNT30628518Juglans regiaVigna unguiculata22.198.2598.883forward
CNT30195551Juglans regiaPisum sativum22.1916.0995.1883forward
CNT30494259Juglans regiaOlea europaea21.6616.0797.5381forward
CNT30506885Juglans regiaNicotiana attenuata21.9315.1397.5682forward
CNT30712442Juglans regiaGlycine max22.194.9596.3983forward
CNT3043428Juglans regiaPrunus dulcis20.8617.4196.1578forward
CNT30163346Juglans regiaPistacia vera20.8611.7897.4478forward
CNT30638745Juglans regiaCapsicum annuum22.7316.798.8285forward
CNT3094527Juglans regiaSolanum tuberosum22.7316.2898.8285forward
CNT30307634Juglans regiaTriticum aestivum21.6612.6893.8381forward
CNT30399552Juglans regiaTriticum turgidum21.6612.7493.8381forward
CNT30561111Juglans regiaActinidia chinensis20.3218.493.4276forward
CNT3085655Juglans regiaVigna radiata22.1917.3397.5983forward
CNT30538793Juglans regiaBrassica napus22.1921.593.9883forward
CNT30234423Juglans regiaBrassica oleracea22.1917.0492.7783forward
CNT30172276Juglans regiaTrifolium pratense21.1216.3296.279forward
CNT30242945Juglans regiaAvena sativa20.8611.7692.3178forward
CNT30313662Juglans regiaCamelina sativa21.1217.1793.6779forward
CNT3060340Juglans regiaArabidopsis lyrata21.1216.0694.9479forward
CNT3073498Juglans regiaBrassica juncea22.1913.4393.9883forward
CNT30260384Juglans regiaBrassica rapa22.197.4593.9883forward
CNT30601041Juglans regiaFraxinus excelsior21.6614.5298.7781forward
CNT30468162Juglans regiaSaccharum spontaneum21.3910.939580forward
CNT30132841Juglans regiaLolium perenne20.861592.3178forward
CNT30605418Juglans regiaGossypium raimondii22.4629.6896.4384forward
CNT30217757Juglans regiaKalanchoe fedtschenkoi20.8619.4597.4478forward
CNT30652772Juglans regiaRosa chinensis21.1213.2897.4779forward
CNT30213082Juglans regiaHelianthus annuus21.9318.2696.3482forward
CNT30126894Juglans regiaCorymbia citriodora21.3922.1697.580forward
CNT30715353Juglans regiaMalus domestica golden21.936.6796.3482forward
CNT30625768Juglans regiaDaucus carota20.0513.0794.6775forward
CNT30722856Juglans regiaTriticum spelta21.6619.1593.8381forward
CNT30348900Juglans regiaEragrostis tef20.8616.8192.3178forward
CNT30478095Juglans regiaArabidopsis halleri21.3918.879580forward
CNT30619768Juglans regiaCajanus cajan21.393297.580forward
CNT30596688Juglans regiaOryza meridionalis21.6615.0395.0681forward
CNT30355299Juglans regiaLactuca sativa21.9311.896.3482forward
CNT30154619Juglans regiaPrunus persica20.8619.2196.1578forward
CNT30423745Juglans regiaPapaver somniferum21.1216.4697.4779forward
CNT30572709Juglans regiaVitis vinifera22.1928.0497.5983forward
CNT30704989Juglans regiaPrunus avium22.4611.0496.4384forward
CNT30642554Juglans regiaCannabis sativa22.4614.5692.8684forward
CNT3032717Juglans regiaTheobroma cacao20.868.9294.8778forward
CNT3057178Juglans regiaAmborella trichopoda21.1213.6992.4179reverse complement
CNT3024261Juglans regiaPopulus trichocarpa22.7310.3897.6585forward
CNT30320568Juglans regiaAsparagus officinalis20.5912.6693.5177forward
CNT30120214Juglans regiaCitrus clementina22.1916.1896.3983forward
CNT3038456Juglans regiaCucumis melo21.391692.580forward
CNT30584684Juglans regiaEchinochloa crusgalli21.3916.7493.7580forward
CNT30499286Juglans regiaDigitaria exilis21.1218.8192.4179forward
CNT30593864Juglans regiaEragrostis curvula20.8613.9892.3178forward
CNT30604511Juglans regiaOryza punctata21.6615.5593.8381forward
CNT30174981Juglans regiaVigna angularis22.1916.8798.883forward
CNT30556718Juglans regiaPanicum hallii21.1217.6392.4179forward
CNT30112246Juglans regiaFicus carica22.4615.0595.2484forward
CNT30724898Juglans regiaLupinus angustifolius22.1915.0495.1883forward
CNT3050740Juglans regiaCucumis sativus21.1211.9794.9479forward
CNT30115234Juglans regiaEutrema salsugineum22.1920.3492.7783forward

Expression of CNT30514313

Peptides detected in this lncRNA

>peptide 1 (56 aa)
PSFSSTAQSYLGFWQAEDRVSISPCHHESQVEEEAYEEIEEEAPKDEAEIQVEADQ*

Sequence

>CNT30514313
CCTTCGTTTTCCTCGACTGCGCAGAGTTATCTAGGGTTTTGGCAGGCGGAGGACAGGGTTTCTATCTCACCGTGTCACCATGAGAGCCAAGTGGAAGAAG
AAGCGTATGAGGAGATTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGAAGCAGATCAATAGTGGGGTCATTTCTCACTCGAGTTCTTTAC
CAGCTTTAGGAGCTTACTGTCTGCCTTTTCTGATTTCATAGCTGTCATTTACGTCTGCTTGAGGAAACATCTCTTGGTGAGATGATAAGCCATTGTTATC
AGTGGAACCTCTAAAAGCTTTGGGTAAAGATCAACCAGGTGATGCGTACCTGACCGAGTAGACCTGTGTCCAGC