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Detailed information on CNT30619768


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Cajanus cajanOryza sativa31.619.892.4179forward
CNT30318276Cajanus cajanCorylus avellana327.7696.2580forward
CNT30514313Cajanus cajanJuglans regia3221.3997.580forward
CNT30698018Cajanus cajanQuercus lobata32.413.3497.5381forward
CNT30376000Cajanus cajanArabidopsis thaliana32.421.6697.5381forward
CNT30500546Cajanus cajanCoffea canephora33.217.9392.7783forward
CNT30278460Cajanus cajanChenopodium quinoa3212.8696.2580forward
CNT3021538Cajanus cajanCitrullus lanatus31.613.8892.4179forward
CNT3070411Cajanus cajanQuercus suber32.413.6697.5381forward
CNT30404042Cajanus cajanBeta vulgaris31.616.4697.4779forward
CNT30631086Cajanus cajanVigna unguiculata62.418.489.1156forward
CNT30195551Cajanus cajanPisum sativum31.615.3196.279forward
CNT30494259Cajanus cajanOlea europaea32.416.0795.0681forward
CNT30503976Cajanus cajanNicotiana attenuata31.212.6296.1578forward
CNT30638745Cajanus cajanCapsicum annuum3215.7298.7580forward
CNT3094527Cajanus cajanSolanum tuberosum3215.3396.2580forward
CNT30191267Cajanus cajanSecale cereale3223.5392.580forward
CNT30307634Cajanus cajanTriticum aestivum3212.5293.7580forward
CNT30399552Cajanus cajanTriticum turgidum3212.5893.7580forward
CNT30538793Cajanus cajanBrassica napus31.620.4794.9479forward
CNT30235682Cajanus cajanBrassica oleracea31.615.4993.6779forward
CNT30172276Cajanus cajanTrifolium pratense31.216.1296.1578forward
CNT30145007Cajanus cajanMedicago truncatula29.212.2997.2673forward
CNT30242945Cajanus cajanAvena sativa31.211.7692.3178forward
CNT30313109Cajanus cajanCamelina sativa31.616.1996.279forward
CNT3060340Cajanus cajanArabidopsis lyrata3216.2697.580forward
CNT3081183Cajanus cajanBrassica juncea32.815.5993.982forward
CNT30260384Cajanus cajanBrassica rapa31.67.0994.9479forward
CNT30611796Cajanus cajanArabis alpina31.217.4993.5978forward
CNT30601041Cajanus cajanFraxinus excelsior32.414.5296.381forward
CNT30132841Cajanus cajanLolium perenne31.21592.3178forward
CNT30608736Cajanus cajanGossypium raimondii31.213.6897.4478forward
CNT30217757Cajanus cajanKalanchoe fedtschenkoi33.620.9594.0584forward
CNT30652772Cajanus cajanRosa chinensis31.613.2894.9479forward
CNT30715353Cajanus cajanMalus domestica golden32.46.5996.381forward
CNT30625768Cajanus cajanDaucus carota29.612.8997.374forward
CNT30722856Cajanus cajanTriticum spelta3218.9193.7580forward
CNT30348934Cajanus cajanEragrostis tef27.23.8495.5968reverse complement
CNT30478095Cajanus cajanArabidopsis halleri31.618.6394.9479forward
CNT30596688Cajanus cajanOryza meridionalis3214.849580forward
CNT30423745Cajanus cajanPapaver somniferum31.216.2597.4478forward
CNT30704989Cajanus cajanPrunus avium32.410.6496.381forward
CNT30642554Cajanus cajanCannabis sativa3213.869580forward
CNT3032717Cajanus cajanTheobroma cacao31.28.9294.8778forward
CNT3057178Cajanus cajanAmborella trichopoda31.213.5292.3178reverse complement
CNT3024261Cajanus cajanPopulus trichocarpa32.49.8995.0681forward
CNT3038228Cajanus cajanCucumis melo31.613.3292.4179forward
CNT30499031Cajanus cajanDigitaria exilis31.214.5892.3178forward
CNT30593864Cajanus cajanEragrostis curvula31.213.9892.3178forward
CNT30604511Cajanus cajanOryza punctata3215.3693.7580forward
CNT30556718Cajanus cajanPanicum hallii31.217.4192.3178forward
CNT30723374Cajanus cajanLupinus angustifolius32.49.1797.5381forward
CNT3050740Cajanus cajanCucumis sativus3212.1292.580forward
CNT30115234Cajanus cajanEutrema salsugineum31.219.1296.1578forward

Expression of CNT30619768

Peptides detected in this lncRNA

>peptide 1 (54 aa)
LIPLLLLSSNCLGFRSRRRVRFFVRHESQVEEEAYEETEEEAPKDETEIQVVYR*

Sequence

>CNT30619768
ATCTTATTCCCCTGTTACTTCTCAGCAGCAATTGTCTAGGGTTTCGGAGTCGAAGAAGGGTAAGGTTTTTCGTTCGCCATGAGAGCCAAGTGGAAGAAGA
AGCGTATGAGGAGACTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCCAAGTAGTATATCGTTGATTTTTTTTACTATCAAGATATATCATGAGATAC
AGGCAAACAGCTCCTCGATTTTCATCTATTATCAAAGATTATAATTCCGG