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Detailed information on CNT30318276


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694844Corylus avellanaOryza sativa7.4721.0493.5177forward
CNT30533222Corylus avellanaEucalyptus grandis7.8624.9298.7781forward
CNT30549577Corylus avellanaIpomoea triloba7.6622.0796.279reverse complement
CNT30514313Corylus avellanaJuglans regia8.1522.4696.4384forward
CNT30701352Corylus avellanaQuercus lobata8.1521.2196.4384forward
CNT30376000Corylus avellanaArabidopsis thaliana7.9521.9393.982forward
CNT3071712Corylus avellanaQuercus suber8.6322.4295.5189forward
CNT30506884Corylus avellanaNicotiana attenuata7.2730.1297.3375forward
CNT3094050Corylus avellanaSolanum tuberosum7.8620.392.5981forward
CNT30191267Corylus avellanaSecale cereale7.8623.8296.381forward
CNT30224947Corylus avellanaHordeum vulgare7.5726.5393.5978forward
CNT30395161Corylus avellanaTriticum turgidum7.5721.9193.5978forward
CNT30538793Corylus avellanaBrassica napus7.5720.2193.5978forward
CNT30467175Corylus avellanaSaccharum spontaneum6.0126.510062forward
CNT30605418Corylus avellanaGossypium raimondii8.0529.3392.7783forward
CNT30219096Corylus avellanaKalanchoe fedtschenkoi7.6622.5197.4779forward
CNT3067939Corylus avellanaLeersia perrieri6.422.9298.4866reverse complement
CNT30652446Corylus avellanaRosa chinensis7.7625.8993.7580forward
CNT30126894Corylus avellanaCorymbia citriodora7.7622.1696.2580forward
CNT30721855Corylus avellanaTriticum spelta7.5720.5393.5978forward
CNT30619768Corylus avellanaCajanus cajan7.763296.2580forward
CNT30572709Corylus avellanaVitis vinifera7.9527.796.3482forward
CNT30704991Corylus avellanaPrunus avium7.9526.5497.5682forward
CNT3024248Corylus avellanaPopulus trichocarpa7.8625.3996.381forward
CNT30175528Corylus avellanaVigna angularis7.7625.6493.7580forward
CNT30725207Corylus avellanaLupinus angustifolius7.6621.9496.279forward

Expression of CNT30318276

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MQLVIHIYRCLKSKAKRKPDGQDFYRLPMSQGSIFLFGKGFYETFKSKRIGTNDAAAS*

Sequence

>CNT30318276
CGGCCCGAGAAATTATGGTTGAACCGTATCGAGTCACTCCGGGCTAGCATTAGGGTTTAGTTATATAAATCCAAACCCCCTTCACCGTATTCTCATTTCG
CCTCGGAGAATTTAGAGTTTCGAGAGTCGAGACAGAGCGTCGGTTTTCCTCAGGCCAAACACCATGAGAGCCAAGTGGAAGAAGAAGCGCATGAGGAGGC
TGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGAACAAGACAAAGTCGCCTTCAGAGGTTTTCCCTATTGCCATTAGGTTGTATCTCTGTAC
AGACGTCTCAAAGACTTCTAAAGTGGGCCATCGTTGCATTGGCAATGACGCAGCTAGTGACAGACTTCTACGGCTGACTGAAAAGTCAAGCCTTACGGGC
TTCTCACGAGCTTAGCAGATATCTCTCAAAGACTTCTGAAGTCGAGTGGGCCATCGTCGCGCTTGGGGCAATTGATGCAGCTAGTGATACACATCTACCG
CTGCTTGAAAAGTAAAGCAAAGCGTAAGCCGGACGGCCAAGACTTTTACAGGCTTCCCATGAGCCAAGGTTCAATTTTTCTTTTCGGAAAGGGATTTTAC
GAGACTTTCAAATCCAAGCGGATTGGGACAAACGACGCAGCTGCCAGCTAGTGAAAAGTAAAGCAAACAGTGAAGACAAATGGTTGAGCTTCGTGGACTT
CCCACAATTCTCCTTGCTCCCTACAATTACGCAGTTGGTTGCGAGAGACCCTTGCCCGCCGTCTGAGCCGGTTGTTTAGACAAAAAAGCCTCATTGGGAG
CGTCTCACAATTCTCTATTGCTATCCCTACACTTTGAGTCTTTGAGCAAGAGATTATAAGGAGTCTTAATGCACATCGGAAGGGGAGGATGTTACGATCC
TAAGTGTCCAACATGACTTAAGTATAATATTAACTTATGTGTATAAGTGTCCTTAAAGGGTAGCTCAATCGGCTGTGGACCACGCCTAATAAAGCGGAGG
TCACTAGTTCAAATCCCTCCTCTATTTTCCC