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Detailed information on CNT30154619


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695362Prunus persicaOryza sativa14.2921.2598.2858reverse complement
CNT30533222Prunus persicaEucalyptus grandis19.212498.7278forward
CNT30317675Prunus persicaCorylus avellana15.2723.0598.3962forward
CNT30549577Prunus persicaIpomoea triloba18.7221.2396.0576reverse complement
CNT30514313Prunus persicaJuglans regia19.2120.8696.1578forward
CNT30506884Prunus persicaNicotiana attenuata18.9730.9298.777forward
CNT3043428Prunus persicaPrunus dulcis10090.6297.29406forward
CNT3096535Prunus persicaSolanum tuberosum20.216.892.6882forward
CNT30191267Prunus persicaSecale cereale19.2122.9496.1578forward
CNT30544783Prunus persicaBrassica napus18.9724.0692.2177forward
CNT30236394Prunus persicaBrassica oleracea18.9720.8192.2177forward
CNT3078045Prunus persicaBrassica juncea19.721.2893.7580forward
CNT30261820Prunus persicaBrassica rapa18.9724.692.2177forward
CNT30467175Prunus persicaSaccharum spontaneum14.7825.6498.3360forward
CNT30609975Prunus persicaGossypium raimondii20.221.6491.4682forward
CNT30217757Prunus persicaKalanchoe fedtschenkoi20.220.4596.3482forward
CNT3067939Prunus persicaLeersia perrieri15.7622.2298.4464reverse complement
CNT30652446Prunus persicaRosa chinensis40.8953.7286.75166forward
CNT30207452Prunus persicaHelianthus annuus15.0221.8696.7261forward
CNT30126894Prunus persicaCorymbia citriodora19.2121.6196.1578forward
CNT30713631Prunus persicaMalus domestica golden23.6518.3995.8396forward
CNT30619791Prunus persicaCajanus cajan19.9530.893.8381forward
CNT30574365Prunus persicaVitis vinifera20.213.996.3482forward
CNT30704989Prunus persicaPrunus avium20.6911.0496.4384forward
CNT3024248Prunus persicaPopulus trichocarpa19.2124.4596.1578forward
CNT3038456Prunus persicaCucumis melo20.6916.894.0584forward
CNT30112128Prunus persicaFicus carica20.9415.5496.4785forward
CNT3048749Prunus persicaCucumis sativus20.6916.1894.0584forward
CNT30115210Prunus persicaEutrema salsugineum18.9731.392.2177forward

Expression of CNT30154619

Peptides detected in this lncRNA

>peptide 1 (62 aa)
NAANPSLPLAHSAPPIFHLHRTTSEEGEQRFQSRFVAMRAKWKKKRMRRLKRKRRKMRQRSK*

>peptide 2 (37 aa)
TLPTPHCLSHIAHPPFFIFIGRLPKKESKGFSLASSP*

Sequence

>CNT30154619
AACGCTGCCAACCCCTCACTGCCTCTCGCACATAGCGCACCCCCCATTTTTCATCTTCATCGGACGACTTCCGAAGAAGGAGAGCAAAGGTTTCAGTCTC
GCTTCGTCGCCATGAGAGCCAAGTGGAAGAAGAAGCGCATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCTAAGTGATAGCTTCAGCT
GTGCAGCTCTTTCGCATGGCGTTTCTATCTTTAGGCTTTTGAGTTTTGTCAGACTTAGTGATTTGTTAGAATTAATATGAGAAACCCTTGGTGTTCTTGT
TTCTATCTTTCTGCTACATTTCCTAATCTTTAAATGAAATTTGACTGTTTTTTTTTTTTTTAAATTAGTTGGTTTAGTTTGATGAAATTATGAATTTACA
TGTTGC