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Detailed information on CNT30320568


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533222Asparagus officinalisEucalyptus grandis12.832493.5978forward
CNT30317675Asparagus officinalisCorylus avellana11.1825.2894.1268forward
CNT30514313Asparagus officinalisJuglans regia12.6620.5993.5177forward
CNT30376000Asparagus officinalisArabidopsis thaliana12.6620.5992.2177forward
CNT30506280Asparagus officinalisNicotiana attenuata12.8326.4492.3178forward
CNT30467175Asparagus officinalisSaccharum spontaneum10.226.596.7762forward
CNT30126894Asparagus officinalisCorymbia citriodora12.8321.6194.8778forward
CNT30619791Asparagus officinalisCajanus cajan12.6629.2893.5177forward
CNT30175528Asparagus officinalisVigna angularis12.524.3693.4276forward
CNT30115231Asparagus officinalisEutrema salsugineum12.6620.8790.9177forward

Expression of CNT30320568

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MFSQSNCCMVFVRLRCLVFGLEANWGNRKKKKEKLLFVLRFSC*

Sequence

>CNT30320568
ATCAGATGAAGGCAGCCGCCTCCGCTCCCCAAAACTTTTAGCCACTCGAAGAACAGAAGAAAAATCGAAACTTTGATCGGCCAAAGCTCTAGAGTTTTCA
GTCCGAAACGATGAGGGCGAAGTGGAAGAAGAAGCGCATGAGGAGACTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAATTGGGTGTAGAC
TACTTCAATCAACGCACCTGACGACATCTAGGTTCAAGATGTTCTCGCAGAGTAACTGCTGCATGGTTTTTGTCAGGCTTCGGTGTTTGGTCTTTGGACT
GGAAGCTAATTGGGGAAACAGAAAGAAGAAAAAAGAAAAACTGCTTTTTGTGCTTCGTTTTAGTTGCTGACCCAAAATCTGTTGCTTCATTCATCTTTGG
TGAAGCTTTAAAATTCAGATTGTTGCATAGATTTGGGGTATCGCTGCAGGTATTCTGCTGTGCAGTGTATTTAGCTCTCTTATTCCTAATGGAGTAATCT
GTTGAGGCAATGAAGATATAACCGCACTCTCAGCTCTAGTCTGCTCTGATCTAGCAATGTAACATGAACAGTAGAGTATGGTAATTTTGAACCGAGTGTT
GCTACGGG