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Detailed information on CNT30234423


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514313Brassica oleraceaJuglans regia17.0422.1992.7783forward
CNT30541757Brassica oleraceaBrassica napus10079.4599.18487forward
CNT3074476Brassica oleraceaBrassica juncea38.1947.5796.77186forward
CNT30261401Brassica oleraceaBrassica rapa21.7711.9694.34106forward
CNT30429165Brassica oleraceaPapaver somniferum17.2523.6691.6784forward

Expression of CNT30234423

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MFSWLPSCRICMDPSLMLNLYLSNHIFTSLITILITLNC

Sequence

>CNT30234423
AAAATTTCTAGCTTAGAAATTAATAAATTATCATTCTTCTAATTTCTTTAGAGCTGGGGAGTATATAAGCGTTAAAGGCCCAAACGCTTACAACCGTTAA
GGCCCAAACATCTAGCTAGGGTTTTCAAGGGTATGGCATATATTAGCAGTGACGCTTCATTTATTTTCTTGTTACCGTCACCGTGAGTCCGCGTTTTGAG
AAAAAAGTGTCTCCACCATGAGAGCCAAGTGGAAGAAGAAGCGTATGAGGAGGTTGAAGAGGAAGAGACGAAAGATGAGACAGCGATCTAAGTAGACTTC
GCATTTCAATCTGCTTCCTTGTTTCTGTTACTTCTCCAAGTACTTTTGTTTGATCTTGTTTCAGTTTTATGTTTTCTTGGCTTCCTTCTTGTAGAATTTG
TATGGATCCTTCATTAATGTTAAACCTTTATCTATCTAATCACATTTTCACCAGCTTAATTACAATCCTTATAACTTTAAATTGCTA