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Detailed information on CNT30478095


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514313Arabidopsis halleriJuglans regia18.8721.399580forward
CNT30701352Arabidopsis halleriQuercus lobata18.8720.292.580forward
CNT30376000Arabidopsis halleriArabidopsis thaliana18.6321.1294.9479forward
CNT3071712Arabidopsis halleriQuercus suber18.8720.1592.580forward
CNT30313077Arabidopsis halleriCamelina sativa93.6388.0383.63397forward
CNT3060259Arabidopsis halleriArabidopsis lyrata88.4444.8691.47375forward
CNT3079435Arabidopsis halleriBrassica juncea34.6723.8289.8147forward
CNT30259134Arabidopsis halleriBrassica rapa20.5210.4195.487forward
CNT30611888Arabidopsis halleriArabis alpina50.2443.6587.79213forward
CNT30605418Arabidopsis halleriGossypium raimondii18.8728.2791.2580forward
CNT30126894Arabidopsis halleriCorymbia citriodora18.421.6192.3178forward
CNT30619768Arabidopsis halleriCajanus cajan18.6331.694.9479forward
CNT30175528Arabidopsis halleriVigna angularis18.1624.6894.8177forward

Expression of CNT30478095

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLDQIESMFSVRIIFITWKDQHELPILLYFSSI

Sequence

>CNT30478095
GCCCATTAAGCGAGCTTCTAGGGTTTTGCCGTTGTTTTAAGGAGCAATAAGAGCATAATCTACAAAATCATTCTAACAACTCCGCCGCTCCTCTCTTGTA
AACAAACCCAAACACATAATCCGAGGAACGAAGGGTACAGCTTCTGCGAAATCAGCAGCATGAGAGCCAAGTGGAAGAAGAAGCGTATGAGGAGATTGAA
GAGGAAGAGACGAAAGATGAGACAGCGATCCAAGTAGATTCGGTAGTTGTTTTGTCTTTCTTCTTTTTAGAGCCAACTCTTGTGAGAGTTTTGTTGGTTT
TGCAATTTACATTTGATTGTTTGAATGTTGGACCAAATCGAATCTATGTTTTCTGTTAGAATTATCTTTATTACATGGAAAGATCAACATGAACTCCCGA
TTCTCCTTTATTTTTCTTCTATCT