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Detailed information on CNT30526086


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000595, E-value = 4e-47

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533222Phaseolus vulgarisEucalyptus grandis15.5425.5495.1883forward
CNT30317675Phaseolus vulgarisCorylus avellana14.7929.3793.6779forward
CNT30514313Phaseolus vulgarisJuglans regia15.5422.1997.5983forward
CNT30376000Phaseolus vulgarisArabidopsis thaliana15.5422.1995.1883forward
CNT30631086Phaseolus vulgarisVigna unguiculata76.224887.71407forward
CNT30711470Phaseolus vulgarisGlycine max47.9445.4787.89256forward
CNT30191267Phaseolus vulgarisSecale cereale15.1723.8292.5981forward
CNT3085655Phaseolus vulgarisVigna radiata86.8996.8788.58464forward
CNT30309894Phaseolus vulgarisCamelina sativa14.6137.3294.8778forward
CNT30605418Phaseolus vulgarisGossypium raimondii15.5429.3393.9883forward
CNT30219096Phaseolus vulgarisKalanchoe fedtschenkoi14.6122.2292.3178forward
CNT30652446Phaseolus vulgarisRosa chinensis15.1726.2193.8381forward
CNT30619636Phaseolus vulgarisCajanus cajan37.4540.8287200forward
CNT30704991Phaseolus vulgarisPrunus avium15.7327.1896.4384forward
CNT3024248Phaseolus vulgarisPopulus trichocarpa15.3625.7195.1282forward
CNT30175528Phaseolus vulgarisVigna angularis37.8364.7491.58202forward
CNT30115231Phaseolus vulgarisEutrema salsugineum15.7322.7694.0584forward

Expression of CNT30526086

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MFGFVSLVLKQCSNQQNFKFAFLIFSFLFGLDVALKFVRAIIILDYIYCTFFRFNYLIF*

Sequence

>CNT30526086
CTTGCTAGGGTTTCTTGTAGGCTATAAATTGCTGCATCAGTAAGATATATTTTCTTCTTAGTTCTGTTACTTCTCAGCAGCAATCGGCTAGGGTTCGGAG
TCAAGAAGGGTTCAGAGTTTGTTCACCATGAGGGCCAAGTGGAAGAAGAAGCGTATGAGGAGATTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCCA
AGTAGTGCGTTAATTCTAGTTTGTTTCTGTTGGTCTTTACAATTATTTATGTTCTCGAAGGTGAAACCCAGTAGTTAGTGTTACTGGCATCTCCTTTTTA
TGTTTTGATACATTTTGTTCGCTTTAATTAGTTGATGTTTGGTTTTGTGTCATTAGTTTTGAAACAATGTTCGAATCAACAGAATTTCAAATTTGCATTT
CTGATTTTCTCTTTTCTATTTGGCCTAGACGTTGCCCTAAAATTTGTTAGGGCAATTATAATTTTGGATTATATCTACTGCACTTTCTTTAGATTTAATT
ATTTAATTTTCTGATTCAAACATCTAACCGCAAT