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Detailed information on CNT30593864


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Eragrostis curvulaOryza sativa16.3122.8110091forward
CNT30533222Eragrostis curvulaEucalyptus grandis13.823.6993.5177forward
CNT30317675Eragrostis curvulaCorylus avellana11.6524.1693.8565forward
CNT30514313Eragrostis curvulaJuglans regia13.9820.8692.3178forward
CNT30191267Eragrostis curvulaSecale cereale14.3423.5393.7580forward
CNT30224947Eragrostis curvulaHordeum vulgare16.6731.6397.8593forward
CNT30309894Eragrostis curvulaCamelina sativa13.9837.3291.0378forward
CNT30467175Eragrostis curvulaSaccharum spontaneum11.1126.595.1662forward
CNT30137004Eragrostis curvulaLolium perenne15.5937.1896.5587forward
CNT3067939Eragrostis curvulaLeersia perrieri12.3723.9694.269reverse complement
CNT30652446Eragrostis curvulaRosa chinensis13.6224.696.0576forward
CNT30207452Eragrostis curvulaHelianthus annuus11.1122.2295.1662forward
CNT30722009Eragrostis curvulaTriticum spelta16.6722.297.8593forward
CNT30348900Eragrostis curvulaEragrostis tef83.1510089.44464forward
CNT30619768Eragrostis curvulaCajanus cajan13.9831.292.3178forward
CNT30572709Eragrostis curvulaVitis vinifera14.5227.3692.5981forward
CNT3024248Eragrostis curvulaPopulus trichocarpa13.824.1492.2177forward
CNT30579574Eragrostis curvulaEchinochloa crusgalli1921.4199.06106forward
CNT30175528Eragrostis curvulaVigna angularis13.6224.3692.1176forward
CNT30725207Eragrostis curvulaLupinus angustifolius13.9821.6792.3178forward

Expression of CNT30593864

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRFLVPEYNCCLWMNDWFNPADCAQSSFLVSESEIDDDCLF*

>peptide 2 (35 aa)
MIPDVLGLSRSCKPSWVLAILALLRVRSCSRTGFM*

>peptide 3 (73 aa)
FRFAHDPSSINQKSEPSPPPIASNPNSKLRRHRKLDRELQPRRRDEGQVEEEENEEAQEEAPKDEAEIQVGAP*

Sequence

>CNT30593864
GTTTCCGTTTCGCCCACGACCCTAGCTCTATAAATCAGAAGAGCGAGCCGTCGCCGCCACCCATCGCGTCCAACCCCAACTCAAAACTCCGCCGCCACCG
CAAGCTAGACCGCGAGCTCCAACCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCA
GAGATCCAAGTAGGCGCTCCTTGAGGAAGGATAGCGCCACCTGCGTCATGTCTCTTGTGTCAGGATGATCCCTGATGTGCTTGGCTTGAGCAGGAGCTGC
AAACCTTCATGGGTTTTAGCAATTTTAGCTCTTTTGAGAGTCAGGTCATGTTCTAGGACTGGCTTTATGTAATGTGAGGATAATCATGTGTTGCTTTAAT
ACTGGGAGATCAGTTAAATGAGATTTCTTGTTCCGGAATATAATTGTTGTCTGTGGATGAATGATTGGTTTAACCCAGCTGATTGTGCCCAAAGCTCGTT
CCTTGTCAGTGAATCTGAGATAGACGACGATTGTTTATTTTAACTATCAACGGTTAAT