Detailed information on CNT30625768


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677986Daucus carotaSetaria viridis12.0222.0494.269forward
CNT30549577Daucus carotaIpomoea triloba13.0720.9594.6775reverse complement
CNT30514313Daucus carotaJuglans regia13.0720.0594.6775forward
CNT30506280Daucus carotaNicotiana attenuata12.7224.7594.5273forward
CNT30538793Daucus carotaBrassica napus13.7620.4792.4179forward
CNT30467175Daucus carotaSaccharum spontaneum10.826.595.1662forward
CNT30219096Daucus carotaKalanchoe fedtschenkoi13.9422.7993.7580forward
CNT3067939Daucus carotaLeersia perrieri11.522.9293.9466reverse complement
CNT30126894Daucus carotaCorymbia citriodora12.7220.2295.8973forward
CNT30619768Daucus carotaCajanus cajan12.8929.697.374forward
CNT30572709Daucus carotaVitis vinifera12.892594.5974forward
CNT30725207Daucus carotaLupinus angustifolius12.8920.5695.9574forward
CNT30115234Daucus carotaEutrema salsugineum14.6320.5992.8684forward

Expression of CNT30625768

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLLVWLFYEDLQKTLLSEMIFFILHNRVL*

Sequence

>CNT30625768
CTTCAAACCAACCAAACCCATTGTATTAACATACGGATAGGCCCAAGAGAGAATTAAAAGCCCATAAGGTGTAGGGTTCCGACTTCCGATGTCTCTGGAT
ATAAATTGGTAGAGAAGAGTAACGAGTCGTCTTGTTTGCTGCTAAAATCGGCTGATCTCTAGTTCTCTACCCAAGTTAATCCAAGATGCGAGCTAAGTGG
AAGAAGAAGCGGATGAGGAGACTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCCAAGTAGACTGTTTGCTGGGTCAATGAGATCACTTCTGCTTGTG
AGTCTACATCTTCATCACCACAATGCTGAATGATTCAAGGGCACTGAAAGCAGAGTTTTCTTGTACTGCTAGCAACTAAGTCAGCTTTAGGATTTATGTT
TGGGGAATGCTGTTAGTTTGGTTATTTTATGAAGACCTTCAAAAAACTTTGTTGTCAGAAATGATCTTTTTTATTTTGCATAATCGGGTTTTATGAATGA
TATAACATTGCAATTTATTTTTAATTGTGTCTTTGCTGGAGTAGTTTAATCTAAAAAGTTTTGTCCTGTTGTCT