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Detailed information on CNT30213082


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533222Helianthus annuusEucalyptus grandis18.4925.5495.1883forward
CNT30514313Helianthus annuusJuglans regia18.2621.9396.3482forward
CNT30701352Helianthus annuusQuercus lobata18.4920.9693.9883forward
CNT30376000Helianthus annuusArabidopsis thaliana18.0421.6691.3681forward
CNT3071712Helianthus annuusQuercus suber18.4920.9193.9883forward
CNT30506884Helianthus annuusNicotiana attenuata17.8232.1396.2580forward
CNT30541697Helianthus annuusBrassica napus19.622.0693.1888forward
CNT3074476Helianthus annuusBrassica juncea18.0420.7291.3681forward
CNT30605418Helianthus annuusGossypium raimondii18.4929.3392.7783forward
CNT30219096Helianthus annuusKalanchoe fedtschenkoi17.1521.9492.2177forward
CNT30126894Helianthus annuusCorymbia citriodora18.0422.4495.0681forward
CNT30619791Helianthus annuusCajanus cajan17.5930.0493.6779forward
CNT30572709Helianthus annuusVitis vinifera19.1529.0594.1986forward
CNT30704991Helianthus annuusPrunus avium18.2626.5493.982forward
CNT3024248Helianthus annuusPopulus trichocarpa18.2625.7193.982forward
CNT30175528Helianthus annuusVigna angularis18.0425.9693.8381forward
CNT30115234Helianthus annuusEutrema salsugineum18.4920.3490.3683forward

Expression of CNT30213082

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MCCVGCLHLCISSLFNHILSWIIIQYDGITLKFFRFYLNYIFLIC

Sequence

>CNT30213082
GCCACACCCCTTTTCCACACAATCAATCTCATCACAGTTTCACACCGTCGGCTAGGGTTTCATAATCTAACCAGAAAAGGGTAAAACTTACGCTTTCCGA
TCACCATGAGAGCCAAGTGGAAGAAGAAGAGAATGAGGAGATTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCTAAGTAATCTGTTTGTTGCTAATC
ATCATCGGTATCGTATTAGTTTCTGTTTTATGTTGTTTGTTTGGATTTCTCCTACTCTTTAGTTGGATTGTTATTTGGATACCGAGATTATAATCATACC
GTTTTATTTCATATGTGTTGTGTTGGTTGTTTACATTTATGCATCAGTAGTTTATTCAATCATATTCTTTCTTGGATTATAATTCAATATGATGGTATCA
CACTCAAGTTTTTCAGATTCTATTTGAATTATATATTTCTGATATGTGC