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Detailed information on CNT30174981


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000983, E-value = 2e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533222Vigna angularisEucalyptus grandis16.8725.5496.3983forward
CNT30317675Vigna angularisCorylus avellana15.4528.2594.7476forward
CNT30514313Vigna angularisJuglans regia16.8722.1998.883forward
CNT30701352Vigna angularisQuercus lobata16.8720.9695.1883forward
CNT3071712Vigna angularisQuercus suber16.8720.9195.1883forward
CNT30524689Vigna angularisPhaseolus vulgaris43.947.4786.57216forward
CNT30628518Vigna angularisVigna unguiculata49.1924.0688.43242forward
CNT30506884Vigna angularisNicotiana attenuata15.6530.9298.777forward
CNT30712442Vigna angularisGlycine max41.6712.2288.78205forward
CNT3074476Vigna angularisBrassica juncea16.6720.9792.6882forward
CNT30605418Vigna angularisGossypium raimondii16.8729.3395.1883forward
CNT30217757Vigna angularisKalanchoe fedtschenkoi17.0720.9596.4384forward
CNT30126894Vigna angularisCorymbia citriodora16.2622.1696.2580forward
CNT30572709Vigna angularisVitis vinifera16.8728.0496.3983forward
CNT3024248Vigna angularisPopulus trichocarpa16.6725.7196.3482forward
CNT30725207Vigna angularisLupinus angustifolius19.5126.6791.6796forward

Expression of CNT30174981

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MIHFIGFFRFCLSLKKYSSRKLTSFNIRSYCISILCLVHILGFWMFRSL*

>peptide 2 (47 aa)
PSSIGMNGSTIKPNACYLLGFLVRYKFLKRKSPVIIRSSVSVLSPRV*

Sequence

>CNT30174981
GCCATCCAGTATAGGTATGAACGGGTCCACGATTAAGCCCAATGCTTGTTATTTGCTAGGGTTTCTGGTTCGCTATAAATTCCTCAAGCGTAAATCCCCG
GTGATAATACGCAGCTCGGTCTCTGTGCTATCTCCCAGGGTTTAACTTCTGAGTCTCCCTTTCGATTTTTGTTCACCATGAGAGCCAAGTGGAAGAAGAA
GCGTATGAGGAGATTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCGAAGTAGTGTGCGTGTTTCCCCAGCAACTATTGCCCTTAGTTTTGTTTCACT
TCTGCTATGTGTTTCTTTCTCAATCTAATGTTATGATACATTTTATTGGTTTCTTTCGCTTCTGTCTTAGCTTAAAAAAATATTCTTCCCGCAAATTAAC
CAGTTTTAATATTCGAAGCTATTGCATATCTATTCTTTGTTTGGTTCACATTTTAGGATTTTGGATGTTCCGATCACTATAACACGTCGCCA