« Back to Papaver somniferum search


Detailed information on CNT30423745


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533222Papaver somniferumEucalyptus grandis16.0423.6994.8177forward
CNT30317675Papaver somniferumCorylus avellana12.9223.0596.7762forward
CNT30549577Papaver somniferumIpomoea triloba16.6722.359580reverse complement
CNT30514313Papaver somniferumJuglans regia16.4621.1297.4779forward
CNT30376000Papaver somniferumArabidopsis thaliana16.2520.8694.8778forward
CNT30506884Papaver somniferumNicotiana attenuata15.6230.1297.3375forward
CNT3094050Papaver somniferumSolanum tuberosum16.6720.059580forward
CNT30538793Papaver somniferumBrassica napus16.2520.2197.4478forward
CNT30236394Papaver somniferumBrassica oleracea16.2521.0893.5978forward
CNT30309894Papaver somniferumCamelina sativa17.0839.2392.6882forward
CNT3078045Papaver somniferumBrassica juncea17.522.3495.2484forward
CNT30261820Papaver somniferumBrassica rapa16.2524.9293.5978forward
CNT30612531Papaver somniferumArabis alpina17.521.1192.8684forward
CNT30605418Papaver somniferumGossypium raimondii16.4627.9293.6779forward
CNT30219096Papaver somniferumKalanchoe fedtschenkoi17.0823.3692.6882forward
CNT30652446Papaver somniferumRosa chinensis15.8324.693.4276forward
CNT30619768Papaver somniferumCajanus cajan16.2531.297.4478forward
CNT30704991Papaver somniferumPrunus avium16.2525.2496.1578forward
CNT3024248Papaver somniferumPopulus trichocarpa16.0424.1494.8177forward
CNT30725207Papaver somniferumLupinus angustifolius16.2521.6794.8778forward
CNT30115210Papaver somniferumEutrema salsugineum16.0431.393.5177forward

Expression of CNT30423745

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MNLKFLVLSFVHLISFYFYEAIFEYDCVSFC*

Sequence

>CNT30423745
ACTAGTTCAAATTTTGCTGCGGCAGTGCGAGAGCAAAATTTTTTCCCACGTGCTGTGAGCACAATTAACCAAAACTAGATAGTATAAATTGTTGCAATCC
CTCTCTAACCCTAGCTCGTCACCATTATCTAACTAAGGTTTTATTTCCGTCGCCACAATGAGAGCCAAGTGGAAGAAGAAGCGTATGAGGAGATTGAAGA
GGAAGCGCCGAAAGATGAGACAGAGATCTAAGTAGAGAGACAGACATTGATGGATTTCTATTTTCATTTTTCGGAGTCGGTTCTTATCTCTTTTGTTGCC
ATCTTAACTTTAGTTAGTGAGAGTTGAATCTTGTTTTGTTATTGTTTTTGATAATACAATTTGTAGGGAAATCAATTTTATGAATCTCAAGTTTTTAGTG
TTATCCTTTGTTCATCTTATTTCATTCTATTTTTATGAAGCTATTTTCGAATATGATTGTGTTTCATTTTGCTGAGTTTC