Detailed information on CNT30549577


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Ipomoea trilobaOryza sativa21.7919.5592.3178reverse complement
CNT30675831Ipomoea trilobaSetaria viridis21.5114.1893.5177reverse complement
CNT30523531Ipomoea trilobaSetaria italica21.5111.2293.5177reverse complement
CNT30318276Ipomoea trilobaCorylus avellana22.077.6696.279reverse complement
CNT30701463Ipomoea trilobaQuercus lobata22.9115.8997.5682reverse complement
CNT30499501Ipomoea trilobaCoffea canephora21.7914.5896.1578reverse complement
CNT30278460Ipomoea trilobaChenopodium quinoa22.0712.796.279reverse complement
CNT3021538Ipomoea trilobaCitrullus lanatus22.0713.8892.4179reverse complement
CNT3070099Ipomoea trilobaQuercus suber22.9114.7297.5682reverse complement
CNT30404042Ipomoea trilobaBeta vulgaris22.0716.4697.4779reverse complement
CNT30524689Ipomoea trilobaPhaseolus vulgaris21.7917.1496.1578reverse complement
CNT30628518Ipomoea trilobaVigna unguiculata21.797.7596.1578reverse complement
CNT30199009Ipomoea trilobaPisum sativum22.0714.8896.279reverse complement
CNT30494259Ipomoea trilobaOlea europaea21.7915.4897.4478reverse complement
CNT30506280Ipomoea trilobaNicotiana attenuata23.4628.4796.4384reverse complement
CNT30712442Ipomoea trilobaGlycine max21.794.6598.7278reverse complement
CNT3043428Ipomoea trilobaPrunus dulcis21.2316.9696.0576reverse complement
CNT30163346Ipomoea trilobaPistacia vera21.7911.7897.4478reverse complement
CNT30635666Ipomoea trilobaCapsicum annuum24.028.9196.5186reverse complement
CNT3094050Ipomoea trilobaSolanum tuberosum24.0221.5595.3586reverse complement
CNT30307634Ipomoea trilobaTriticum aestivum21.7912.2193.5978reverse complement
CNT30399552Ipomoea trilobaTriticum turgidum21.7912.2693.5978reverse complement
CNT30562614Ipomoea trilobaActinidia chinensis22.3513.619580reverse complement
CNT3085016Ipomoea trilobaVigna radiata21.7911.1396.1578reverse complement
CNT30542021Ipomoea trilobaBrassica napus21.7914.5593.5978reverse complement
CNT30172276Ipomoea trilobaTrifolium pratense23.7417.5695.2985reverse complement
CNT30242945Ipomoea trilobaAvena sativa21.7911.7692.3178reverse complement
CNT30313662Ipomoea trilobaCamelina sativa22.3517.3993.7580reverse complement
CNT3083138Ipomoea trilobaBrassica juncea21.7913.9893.5978reverse complement
CNT30259134Ipomoea trilobaBrassica rapa21.799.3393.5978reverse complement
CNT30611888Ipomoea trilobaArabis alpina22.9116.892.6882reverse complement
CNT30601041Ipomoea trilobaFraxinus excelsior21.7913.9896.1578reverse complement
CNT30468162Ipomoea trilobaSaccharum spontaneum21.5110.5294.8177reverse complement
CNT30608736Ipomoea trilobaGossypium raimondii22.3514.049580reverse complement
CNT30217757Ipomoea trilobaKalanchoe fedtschenkoi21.7919.4597.4478reverse complement
CNT30652772Ipomoea trilobaRosa chinensis21.7913.1194.8778reverse complement
CNT30202986Ipomoea trilobaHelianthus annuus22.9115.3692.6882reverse complement
CNT30715353Ipomoea trilobaMalus domestica golden21.796.3596.1578reverse complement
CNT30625768Ipomoea trilobaDaucus carota20.9513.0794.6775reverse complement
CNT30722856Ipomoea trilobaTriticum spelta21.7918.4493.5978reverse complement
CNT30341799Ipomoea trilobaEragrostis tef22.0717.4892.4179reverse complement
CNT30479698Ipomoea trilobaArabidopsis halleri22.3517.479580reverse complement
CNT30596688Ipomoea trilobaOryza meridionalis21.7914.4794.8778reverse complement
CNT30355299Ipomoea trilobaLactuca sativa21.5111.0893.5177reverse complement
CNT30154619Ipomoea trilobaPrunus persica21.2318.7296.0576reverse complement
CNT30423745Ipomoea trilobaPapaver somniferum22.3516.679580reverse complement
CNT30704989Ipomoea trilobaPrunus avium23.4611.0495.2484reverse complement
CNT30642554Ipomoea trilobaCannabis sativa22.9114.2192.6882reverse complement
CNT3032717Ipomoea trilobaTheobroma cacao21.798.9294.8778reverse complement
CNT3057178Ipomoea trilobaAmborella trichopoda22.9114.2192.6882forward
CNT3025185Ipomoea trilobaPopulus trichocarpa21.7913.0498.7278reverse complement
CNT30324349Ipomoea trilobaAsparagus officinalis21.7916.3292.3178reverse complement
CNT30120214Ipomoea trilobaCitrus clementina21.7915.298.7278reverse complement
CNT3038456Ipomoea trilobaCucumis melo21.7915.694.8778reverse complement
CNT30581427Ipomoea trilobaEchinochloa crusgalli22.0718.9993.6779reverse complement
CNT30604511Ipomoea trilobaOryza punctata21.7914.9793.5978reverse complement
CNT30175235Ipomoea trilobaVigna angularis21.7912.3496.1578reverse complement
CNT30556718Ipomoea trilobaPanicum hallii23.4618.7592.8684reverse complement
CNT30112246Ipomoea trilobaFicus carica21.7913.9897.4478reverse complement
CNT30724898Ipomoea trilobaLupinus angustifolius22.0714.3196.279reverse complement
CNT3050740Ipomoea trilobaCucumis sativus23.4612.7394.0584reverse complement
CNT30115398Ipomoea trilobaEutrema salsugineum21.7915.9294.8778reverse complement

Expression of CNT30549577

Sequence

>CNT30549577
TTGTTTTTTTTTAGATTATAAAACTATAAAATCCATATCAAAATATCGATGAATCCACGATGCAGAAATTCATTAAAATACATTACGGTAATAATGTTAC
TGAGTCATTCCAGACAGTAATCCTAAAACAGCAGTAATTAATTAAAGTAAGAGAAACGATTGCGAGAGATGAGAATCTGCAAATCTACTTGGATCTCTGC
CTCATCTTTCGGCGCTTCCTCTTCAACCTCCTCATACGCTTCTTCTTCCACTTAGCTCTCATTTTGAATCGAGAGTCGTGTGAGTTCCTTGACTACTTTC
GACCAAATCTCTGATAGCCTCCGACGACAAAGAAGAAGCGACGATTGGGAAACAGAGC