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Detailed information on CNT30562614


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317675Actinidia chinensisCorylus avellana11.0524.1695.3865forward
CNT30549577Actinidia chinensisIpomoea triloba13.6122.359580reverse complement
CNT3094050Actinidia chinensisSolanum tuberosum13.6120.0593.7580forward
CNT30309894Actinidia chinensisCamelina sativa13.9539.2392.6882forward
CNT30217757Actinidia chinensisKalanchoe fedtschenkoi14.1220.792.7783forward
CNT30620847Actinidia chinensisCajanus cajan13.2721.7996.1578forward
CNT30429165Actinidia chinensisPapaver somniferum13.4422.2596.279forward
CNT30704991Actinidia chinensisPrunus avium13.2725.2496.1578forward
CNT30175528Actinidia chinensisVigna angularis12.9324.3694.7476forward

Expression of CNT30562614

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MHYNKMARPDLPSSLSLAGVAFEFTGILKESLRCLGS*

Sequence

>CNT30562614
CTCAACTGGGTCTCAGACCAGCCCAGATTAGGGCCCAATTTCGGAAACCCTAGACCTACATAAATGAAACTCCGTTACTTTTGCTCGCTGTCGTCGTACT
TGGGTTGATCTGGAGAGTTCGTTGAACACAGACGCAAAAGAGAGAAGTAATCGAAGAAGGTTGCGAATCGCAATGAGGGCTAAGTGGAAGAAGAAGCGCA
TGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGACAAAGATCCAAGTAGACAATGCATTATAACAAGATGGCTCGTCCTGATTTGCCTTCTTCTCTGTC
GCTTGCAGGTGTTGCCTTCGAGTTTACGGGTATTTTGAAGGAGAGCTTGCGTTGCCTCGGTTCCTAGTGTCATTTTTTTGTTTTTCCCACCACTTGAGAG
TTTTGCTGCTTTGATCATTCTTATTTGCAACTGAGTGACTTATGGATCTTGTGTTAGAGATATTACTTTTATTGAGGACATCAAGTGGATTTTTATGGAT
TAATGTGAGTGGTAATCTTTTTTGAACATGCTTTTTTTGAATTGTGATTTATTTGCCTTCGTCAAATGGCTTATGCAATTCTTGGGTA