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Detailed information on CNT30635666


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549577Capsicum annuumIpomoea triloba8.9124.0296.5186reverse complement
CNT30506280Capsicum annuumNicotiana attenuata13.7845.0891.73133forward
CNT3094050Capsicum annuumSolanum tuberosum11.8128.5794.74114forward
CNT30236394Capsicum annuumBrassica oleracea8.0821.0893.5978forward
CNT3075181Capsicum annuumBrassica juncea8.0821.3793.5978forward
CNT30261820Capsicum annuumBrassica rapa8.0824.9293.5978forward
CNT30612531Capsicum annuumArabis alpina8.2920.192.580forward
CNT3067939Capsicum annuumLeersia perrieri6.8422.9295.4566reverse complement
CNT30126894Capsicum annuumCorymbia citriodora7.9821.3397.477forward
CNT30115210Capsicum annuumEutrema salsugineum7.9831.393.5177forward

Expression of CNT30635666

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVLIETLVVESSQRLVEGTSDTPDSDKLGTKTRIFDT*

>peptide 2 (43 aa)
MSVWVSSATGIRNLKSRRRFLSLDLNHSQLNLFETASIIFLWY*

>peptide 3 (61 aa)
MRGLELERWKYMIISLGQHRSDHCFGMVMGGLQSSLHSVLLQERDLIVLSDHIFISICRVK*

Sequence

>CNT30635666
CAGAACCACGAGATTGGGCCTAAGAACTAAATCCAAACCACATTTCTCAAGTCTCTAGGGTTTCCTATATAATCCACCTAAAACCCTAGTATCATTTTCC
TCCCATTTAGTGCCGCATCTTTTATTTGACAGATTTGCTCTGACAAGTAAAGAAGGCTCTTTGATTATCACCAATTCAGAATGAGAGCTAAGTGGAAGAA
GAAGCGTATGAGGAGATTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCTAAGTAGAACCGCATTCTGCAGTTCTCAATGTCGGTGTGGGTGTCCAGT
GCTACTGGCATAAGAAATTTGAAGTCTCGCAGGCGGTTCCTTTCCCTTGACCTTAACCATTCTCAGTTGAACCTCTTTGAGACTGCTAGCATCATTTTCC
TATGGTATTGATTGAAACTCTGGTGGTAGAAAGCTCCCAAAGGTTAGTGGAGGGAACATCTGACACACCTGATTCAGATAAACTAGGAACCAAGACTCGC
ATCTTTGACACATGAAGATACCTGCTATCGTAAGAATCCTAAAGACCAGGTGAGGGGACATATTGCTTCTTTGCTATTGAATTCCACAAACAGGATTAAT
TAGTGTATGAGAGGGTGGGGCTGGCACTGTCTTCCGTCAGCGGGGCATTGGTCCAAGGTCACCATTTGTGGTATCGAGGCTTAATGTGCAGCCCCTCTTG
TTCAATTTTCTATGGTGTGCATGACACATTGTTGTTCTAGACCCAAGGTGTAATTGAGTGTTTATGAGAGGGCTAGAGCTAGAAAGGTGGAAGTATATGA
TCATTTCCCTTGGGCAACATAGATCTGACCATTGCTTTGGTATGGTAATGGGAGGGCTGCAAAGTTCACTTCATTCAGTTTTACTGCAAGAGAGAGATTT
GATCGTCCTGAGTGATCATATTTTCATTAGTATTTGCAGGGTGAAGTAAAGGTTGTATTGTCTGG