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Detailed information on CNT30608736


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549577Gossypium raimondiiIpomoea triloba14.0422.359580reverse complement
CNT30376000Gossypium raimondiiArabidopsis thaliana13.6820.8694.8778forward
CNT30224947Gossypium raimondiiHordeum vulgare13.8626.8791.1479forward
CNT30309894Gossypium raimondiiCamelina sativa13.8637.892.4179forward
CNT30219096Gossypium raimondiiKalanchoe fedtschenkoi14.0422.799580forward
CNT30619768Gossypium raimondiiCajanus cajan13.6831.297.4478forward
CNT3032717Gossypium raimondiiTheobroma cacao28.4218.5483.95162forward
CNT3024248Gossypium raimondiiPopulus trichocarpa13.5124.1497.477forward
CNT30725207Gossypium raimondiiLupinus angustifolius13.6821.6797.4478forward

Expression of CNT30608736

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MFEIETFVLLIWPIICEIDCFLISSSIYEIVEMAFDW

Sequence

>CNT30608736
CGTGAACACAAATAGTTCACACGAACGAACTAGGGTTTGGGAAGCGTAGTCCTTTAAATATCAATAGAAGCTCTCCTCTTCGAAATTCTCAATCAAAACG
TCACCATTCTAAAGAGATTATCGTAAATTCGAGTACAAAGCGCTAACCAAGATGAGAGCCAAGTGGAAGAAGAAGCGTATGAGGAGGCTGAAAAGGAAGC
GCCGAAAGATGAGACAGAGATCCAAGTAGATGCGCCTTGGGCTGAAATAGTTTTGCCCTGACAATCCCTTGTCTTCATAATTATCCTGCATATGTTGCTT
GAAGTTGTGAAGATTGAAGGGTATTTTCAGGAAACCTTATCTGTTGTCTTCTAAATCTAGGTTAAAGTTTTAAGACTGTTTGAGCTGTTTGTCTAGTACT
ATTAGATATTATGTTGGGGTTTTGTGGTTTGATCTGTGTAAGCAGTTAACATCCTAAATGTTTGAAATTGAAACTTTTGTTCTTCTTATATGGCCTATAA
TATGCGAGATAGATTGTTTCCTTATATCTTCTAGCATTTATGAGATTGTTGAAATGGCCTTCGACTGGTT