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Detailed information on CNT30524689


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549577Phaseolus vulgarisIpomoea triloba17.1421.7996.1578reverse complement
CNT30701352Phaseolus vulgarisQuercus lobata18.2420.9695.1883forward
CNT3071712Phaseolus vulgarisQuercus suber18.2420.9195.1883forward
CNT30628653Phaseolus vulgarisVigna unguiculata48.5714.386.43221forward
CNT30506280Phaseolus vulgarisNicotiana attenuata16.9226.196.177forward
CNT30538793Phaseolus vulgarisBrassica napus18.6822.0294.1285forward
CNT30236394Phaseolus vulgarisBrassica oleracea17.5821.6293.7580forward
CNT3075181Phaseolus vulgarisBrassica juncea17.5821.9293.7580forward
CNT30261820Phaseolus vulgarisBrassica rapa17.5825.5693.7580forward
CNT30126894Phaseolus vulgarisCorymbia citriodora17.5822.1696.2580forward
CNT30429165Phaseolus vulgarisPapaver somniferum18.0223.196.3482forward
CNT30572709Phaseolus vulgarisVitis vinifera18.2428.0496.3983forward
CNT30174981Phaseolus vulgarisVigna angularis47.4743.986.57216forward
CNT30725207Phaseolus vulgarisLupinus angustifolius17.3621.9494.9479forward
CNT30115210Phaseolus vulgarisEutrema salsugineum17.1431.7193.5978forward

Expression of CNT30524689

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MISLSRDVLSVHLIVLFIFFDTLIFSYDQ

>peptide 2 (32 aa)
LFARVFGCYKFPKRKSLLIIRSLVSVLSPPSV*

>peptide 3 (34 aa)
MSYKRFKASNEAIQQGFTANPLNTVSQLSELLSC*

Sequence

>CNT30524689
GTTATTTGCTAGGGTTTTTGGTTGCTATAAATTCCCCAAACGTAAGTCTCTGTTAATAATACGCAGCCTAGTCTCAGTGCTTTCTCCGCCCAGTGTATAA
CTTCTGAGTCTCGTTTCGGTTGCTGATCTTCACCATGAGAGCTAAGTGGAAGAAGAAGCGTATGAGGAGATTGAAGAGGAAGCGCCGAAAGATGAGACAG
AGATCGAAGTAGTGAATAACGTTATGTCTTACAAGAGGTTTAAGGCCTCCAATGAAGCAATTCAACAAGGTTTCACTGCCAATCCTTTGAACACGGTTTC
TCAGCTAAGTGAACTATTGTCTTGCTAAACTCATTGTCATTATTTGTTTTTAATAGTTTCTCCAAAGATGATTTCATTATCTCGAGATGTATTGTCGGTT
CATCTAATAGTTTTATTTATATTCTTTGATACTCTTATATTTTCTTACGATCAAG