« Back to Asparagus officinalis search


Detailed information on CNT30324349


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695362Asparagus officinalisOryza sativa12.7622.3496.7261reverse complement
CNT30549577Asparagus officinalisIpomoea triloba16.3221.7992.3178reverse complement
CNT30191267Asparagus officinalisSecale cereale16.5323.2494.9479forward
CNT30538793Asparagus officinalisBrassica napus16.5320.4792.4179forward
CNT3067939Asparagus officinalisLeersia perrieri14.0223.2697.0167reverse complement
CNT30429165Asparagus officinalisPapaver somniferum16.3221.9793.5978forward
CNT30572709Asparagus officinalisVitis vinifera16.5326.6992.4179forward

Expression of CNT30324349

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFQLIGCLFGAWKLSRVHWLNYNFHFMMHLQ*

>peptide 2 (40 aa)
MPLWSLETLTCSLVELQFPFHDASSIISCMVLLLFMMHLQ*

Sequence

>CNT30324349
CTGGAGTCTAGCGCTATAAATAGTCAAGGGCATCTCTAGATTGTTCATCCTTTGAGATCTTTTTTGACGGCGTTCGTGAGGTAGAAGAACATCGATCGTC
GTGATGAGGGCTAAGTGGAAGAAGAAGCGCATGAGGAGACTTAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCTAAGTAGGAATTTTCTTGTGGGGTTA
TTATCAGCTGTTTTAATGAGAGGATTTAGGCTACTAGTTATTTGTTTTGTACTCTTTGCATTAGCGAACAATTGCAATTTGCACTATATTATGTAATGTA
ATTGCTTTGACAATTTTGCTTATTTCACTACCTTTATGTTTCAACTCATTGGATGCCTCTTTGGAGCTTGGAAACTCTCACGTGTTCATTGGTTGAACTA
CAATTTCCATTTCATGATGCATCTTCAATAATTTCCTGTATGGTGCTCTTATTGTTCATGATGCATCTTCAATAATTT