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Detailed information on CNT30724674


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000220, E-value = 8e-56

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30331419Lupinus angustifoliusDioscorea rotundata17.8454.881.82154forward
CNT30593783Lupinus angustifoliusEragrostis curvula21.6735.4280.75187forward

Expression of CNT30724674

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MDVFINISEKSGASKQCHPKQQQPTNTVLVESEETNTT*

>peptide 2 (33 aa)
LLSNKSLFKSNDISQDYSSPEKKRWSSTYKNTA*

>peptide 3 (50 aa)
MEFNIQKYCIKHTGRSNKDNIWMFSSTFQKKAGHQNNAIQSNNNPQIQFW*

>peptide 4 (40 aa)
MRSNLWSMRENTSATLVELEIMQTALCTLARSPPGTTVGG*

Sequence

>CNT30724674
ATTTATTAAGTAACAAATCTTTATTCAAATCCAATGATATAAGCCAAGATTACTCTTCCCCCGAAAAAAAAAGATGGAGTTCAACATACAAAAATACTGC
ATAAAACACACTGGCAGAAGCAATAAAGATAATATATGGATGTTTTCATCAACATTTCAGAAAAAAGCGGGGCATCAAAACAATGCCATCCAAAGCAACA
ACAACCCACAAATACAGTTCTGGTAGAATCTGAAGAAACAAACACAACATAGAAAGGTCATACAAGAAAAACAAAAGGCCACCAGAATCAGAAATAGATT
CTATCTAGTAGTCTTCAATGTCATCATCACCACCCTCAGCAGACTCAGCACCCACTTCTTCATAATCCTTCTCAAGGGCAGCAAGATCTTCACGAGCCTC
AGAGAATTCACCTTCTTCCATACCCTCACCCACATACCAGTGAACAAAAGCACGCTTGGCATACATGAGATCAAACTTGTGGTCAATGCGAGAGAACACC
TCGGCCACACTGGTCGAGTTAGAAATCATGCAAACAGCCCTCTGCACCTTGGCAAGGTCACCTCCGGGAACAACAGTAGGTGGCTGATAGTTAATACCAC
ACTTGAAACCGGTAGGGCACCAATCAACAAACTGAATGGTTCGCTTTGTCTTGATGGTGGAAACCTGAGGAGAAGGGTAAACAGTGAACCCGAGCTTTGA
TTTCTTTCCATAGTCAACGGACAAACGTTCCAACAGAAGGGAACCGAGACCAGAACCAGTTCCTCCACCAACAGCATTGAACACCAAGAAACCTTGGAGG
CCAGTGCAGTTATCAGCAAGCTTCCTGATACGGTCCAAGCACAGATCAACGATCTCTTTCCCA