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Detailed information on CNT30678752


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30217674Setaria viridisKalanchoe fedtschenkoi23.9847.6285.88170forward
CNT30721298Setaria viridisTriticum spelta47.11102.7788.92334forward
CNT30597159Setaria viridisOryza meridionalis38.3637.5790.07272forward
CNT30593783Setaria viridisEragrostis curvula32.343.3792.58229forward

Expression of CNT30678752

Peptides detected in this lncRNA

>peptide 1 (62 aa)
LIQKRSRTKQVSYNIRCCKRHTTTDNSSNRHTDTQQDKIGATRADHRITAAHRPDTAAGSIV*

>peptide 2 (46 aa)
MPHLNPVGHQSTNWMVRLVLMVATAALTSLGTTSPRYMRTAQRRCW*

>peptide 3 (34 aa)
MRENTSTTLVELEIMHTARCTLARSPPGTTLGGW*

Sequence

>CNT30678752
TTAATCCAGAAACGAAGCAGGACTAAACAAGTTTCTTACAACATAAGATGTTGTAAACGACATACGACGACAGATAACAGTTCAAACCGACACACCGACA
CACAACAAGATAAGATAGGAGCCACTCGGGCAGATCATAGGATAACCGCGGCACACAGGCCTGACACAGCAGCAGGAAGCATCGTCTAGTACTCGTCACC
CTCGTCTCCTTCCTCGCCCTCGTCGAACTCAGCGCCGACCTCCTCGTAGTCCTTCTCGAGCGCAGCCAGGTCAAACTTGTGGTCGATGCGGGAGAACACC
TCGACCACGCTGGTGGAGTTGGAGATCATGCACACGGCACGCTGCACCTTGGCCAGGTCACCGCCAGGCACCACGCTGGGGGGCTGGTAGTTGATGCCGC
ACTTGAACCCAGTGGGGCACCAGTCCACGAACTGGATGGTGCGCTTGGTCTTGATGGTGGCAACAGCAGCGTTGACGTCCTTGGGCACCACATCACCACG
GTACATGAGGACGGCTCAAAGGCGCTGTTGGTGATCTCTGCAACAGACAGCTGCTCATGGTAGGCCTTCTCGGCAGAGATGACTGGTGCATAGGATGAAA
GCATGAAGTGGATCCTCGGGTAGGGCACCAAGTTGGTCTGGAACTCGTTCACATCCACGTTCAGAGCACCATCGAACCTCAGGGAGGCAATCAGAGATGA
GATGACCTG